| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,670,457 | A→T | 7.2% | intergenic (+46/‑39) | metF → / → PP_4978 | 5,10‑methylenetetrahydrofolate reductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,670,457 | 0 | A | T | 7.2% | 199.0 / 5.6 | 69 | intergenic (+46/‑39) | metF/PP_4978 | 5,10‑methylenetetrahydrofolate reductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (31/33); new base T (3/2); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
CGAACAGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCG > NC_002947/5670309‑5670604 | cGAACAGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCa < 2:227672/149‑1 (MQ=255) gAACAGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCa > 2:257619/1‑148 (MQ=255) gAACAGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCAt < 1:170758/149‑1 (MQ=255) aGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGAc < 2:231815/149‑1 (MQ=255) gCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATa < 1:296466/139‑1 (MQ=255) gCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATa > 2:296466/1‑139 (MQ=255) cAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGAATAAGGCTTTAGTCTATGACCAAAGcc > 7:170420/1‑148 (MQ=255) cAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGAATAAGGCTTTAGTCTATGACCAAAGcc < 8:170420/148‑1 (MQ=255) aaGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTaaa > 6:212774/1‑144 (MQ=255) aaGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTaaa < 5:212774/144‑1 (MQ=255) aaGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCtt < 1:318079/149‑1 (MQ=255) ggcggcGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTAt < 1:51087/149‑1 (MQ=255) ccAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCg > 8:238060/1‑149 (MQ=255) cAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCgg < 6:12528/149‑1 (MQ=255) aGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCggg < 8:221831/149‑1 (MQ=255) tGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTaaa > 5:21543/1‑149 (MQ=255) cACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTaaa < 5:89972/147‑1 (MQ=255) cTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCt > 1:159003/1‑149 (MQ=255) ccTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGGGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgcct < 1:257619/149‑1 (MQ=255) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgcctg < 8:113507/149‑1 (MQ=255) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgcctg > 4:81990/1‑149 (MQ=255) cTTGAACCAGGATGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAATTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgcctg > 7:165284/1‑149 (MQ=255) ttGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTT‑AACAGGTCTtgcctgc > 3:113557/1‑148 (MQ=255) ccAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATg > 5:242543/1‑148 (MQ=255) cAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATg > 1:147192/1‑147 (MQ=255) cAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATg > 8:293963/1‑147 (MQ=255) aGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgcag < 5:324219/149‑1 (MQ=255) gCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTc < 6:74838/112‑1 (MQ=255) gCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTc > 5:74838/1‑112 (MQ=255) cTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgcagca > 5:209302/1‑148 (MQ=255) aaCCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGAACAcc > 7:270236/1‑149 (MQ=255) ccGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCa < 6:108502/149‑1 (MQ=255) cttgCGATCTGGAACAAGCTGAATCATCCTCTATGAAATCTATTTGCAATTTCTGCTTAATAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTc < 8:165284/146‑1 (MQ=255) cTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTc < 6:242543/149‑1 (MQ=255) gCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTcgc < 7:293963/148‑1 (MQ=255) gCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTcgc < 4:281158/148‑1 (MQ=255) cTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgc < 5:208723/125‑1 (MQ=255) cTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgc > 6:208723/1‑125 (MQ=255) tGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgc < 1:131309/115‑1 (MQ=255) tGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTtgc > 2:131309/1‑115 (MQ=255) tGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCca > 4:73544/1‑147 (MQ=255) gAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTT‑AACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCca < 4:113557/144‑1 (MQ=255) cTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGtata > 4:24707/1‑149 (MQ=255) tGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATAc < 5:273133/135‑1 (MQ=255) tGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGccc > 3:161585/1‑149 (MQ=255) tGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTCGTCATAGACTAAAGCATTATTCATTTTCGGGTTAAACAGGTCTTTCATGCCATGCAGCACACACAACCTTCGCGCCCACAGCTTGTATAc > 6:273133/1‑135 (MQ=255) aaaTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCg < 2:159003/148‑1 (MQ=255) aaaTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCg < 3:81990/148‑1 (MQ=255) ggCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTAc > 4:155561/1‑148 (MQ=255) tGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAg > 7:236299/1‑149 (MQ=255) cTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGc < 3:24707/148‑1 (MQ=255) ccgaaaaTGAATAAGGCTTTAGTCTATGACCAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTg > 3:201416/5‑149 (MQ=38) ccgaaaaTGAATAAGGCTTTAGTCTATGACCAAAGCCTTAATCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCa > 8:99132/5‑140 (MQ=37) ccgaaaaTGAATAAGGCTTTAGTCTATGACCAAAGCCTTAATCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCa < 7:99132/136‑1 (MQ=37) aaGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGAACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGc < 8:270236/149‑1 (MQ=255) gAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGcc < 1:264211/121‑1 (MQ=255) gAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGcc > 2:264211/1‑121 (MQ=255) aaaTGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCtt > 3:150357/1‑148 (MQ=255) aaTGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGtat > 3:209537/1‑104 (MQ=255) aaTGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGtat < 4:209537/104‑1 (MQ=255) tGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGc < 7:238060/149‑1 (MQ=255) ttAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTg > 6:148532/1‑111 (MQ=255) ttAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTg < 5:148532/111‑1 (MQ=255) aGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTc < 4:161585/149‑1 (MQ=255) gCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTg < 2:306560/106‑1 (MQ=255) gCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTg > 1:306560/1‑106 (MQ=255) gCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCAt > 4:260861/1‑123 (MQ=255) gCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCAt < 3:260861/123‑1 (MQ=255) gTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCt > 1:275153/1‑149 (MQ=255) tCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTc > 3:73891/1‑149 (MQ=255) cATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCg > 4:161061/1‑149 (MQ=255) | CGAACAGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATAGACTAAAGCCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCG > NC_002947/5670309‑5670604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |