Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,026,542 G→T 7.2% V472L (GTG→TTG) ‡ PP_5276 → phospholipase D family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,026,5420GT 7.2% 257.5 / 6.7 82V472L (GTG→TTG) ‡PP_5276phospholipase D family protein
Reads supporting (aligned to +/- strand):  ref base G (40/36);  new base T (2/4);  total (42/40)
Fisher's exact test for biased strand distribution p-value = 4.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

CAAGACCTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGAT  >  NC_002947/6026397‑6026689
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cAAGACCTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTg                                                                                                                                                   >  8:183137/1‑148 (MQ=255)
   gACCTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAAc                                                                                                                                               <  7:183137/149‑1 (MQ=255)
      cTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAAc                                                                                                                                               <  1:75781/146‑1 (MQ=255)
      cTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAAc                                                                                                                                               >  2:75781/1‑146 (MQ=255)
         cATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATa                                                                                                                                          <  6:108571/148‑1 (MQ=255)
          aTCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAg                                                                                                                                         <  6:108462/148‑1 (MQ=255)
           tCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgct                                                                                                                                       <  6:93708/149‑3 (MQ=255)
           tCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgct                                                                                                                                       <  6:89258/149‑3 (MQ=255)
              gCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgctca                                                                                                                                     <  1:238807/148‑5 (MQ=255)
              gCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgct                                                                                                                                       >  2:238807/1‑144 (MQ=255)
                  gTTCATCTTCGACGCGCGCTCAGTATTGTGGAACTCCGAGGTCGGGGTACTGGTGGACATCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCTGGGTATGGGGCCTGCGCTTAGCTATCAGGTGAAACTGATAGGTAACAAg                                                                                                                                 <  8:82774/148‑1 (MQ=255)
                  gTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGc                                                                                                                                >  7:189503/1‑149 (MQ=255)
                  gTTCAACTTCGACCCGCGCTCAGTATTGTGGAAAACAGAGGTCCGGGTACTGGTGGACAGCCCTGACCAGTCCGAATACACCCGCGAACTGGCCCAGCACGCTATGGCGCCTGCTCTGACCTATCAGGTGAAACTGATAGCTAACaacc                                                                                                                                >  7:138225/1‑147 (MQ=255)
                     cAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTg                                                                                                                              <  6:117727/148‑1 (MQ=255)
                     cAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCAGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgctc                                                                                                                                      <  6:9236/140‑4 (MQ=255)
                     cAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCAGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGTTTCACCTGATAgctc                                                                                                                                      >  5:9236/1‑137 (MQ=255)
                              cccGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGa                                                                                                                    >  3:93614/1‑149 (MQ=255)
                                 gcgcTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGAcc                                                                                                                  >  8:205815/1‑148 (MQ=255)
                                   gcTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAg                                                                                                               <  2:117573/149‑1 (MQ=255)
                                     tCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAgg                                                                                                              >  8:179137/1‑148 (MQ=255)
                                         tATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACAGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAAt                                                                                                         >  5:230620/1‑149 (MQ=255)
                                          aTTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGACCAGCAGGGTATGGCGCCTGCGCTGAGCTATCATGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAAt                                                                                                         <  7:256911/148‑1 (MQ=255)
                                              tgGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGAt                                                                                                                                           >  8:269088/1‑110 (MQ=255)
                                              tgGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGAt                                                                                                                                           <  7:269088/110‑1 (MQ=255)
                                              tgGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGcc                                                                                                     >  1:67249/1‑148 (MQ=255)
                                                   cacCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACgg                                                                                                >  5:171209/1‑148 (MQ=255)
                                                   cacCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGc                                                                                               <  4:93614/149‑1 (MQ=255)
                                                    acCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCa                                                                                              >  8:244877/1‑149 (MQ=255)
                                                      cGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACg                                                                                            >  3:71561/1‑149 (MQ=255)
                                                      cGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACg                                                                                            >  5:275655/1‑149 (MQ=255)
                                                             ggggTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATgg                                                                                                       <  8:166489/131‑1 (MQ=255)
                                                             ggggTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATgg                                                                                                       >  7:166489/1‑131 (MQ=255)
                                                               ggTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGt                                                                                   <  7:179137/149‑1 (MQ=255)
                                                                    tggtggACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAg                                                                              >  6:296505/1‑149 (MQ=255)
                                                                      gtggACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGcc                                                                            >  6:64370/1‑149 (MQ=255)
                                                                            aGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCcgggcgg                                                                      <  6:171209/149‑1 (MQ=255)
                                                                            aGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCcgggcgg                                                                      >  1:144606/1‑149 (MQ=255)
                                                                             gaccGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACCAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCcgggcgg                                                                      >  1:207375/3‑148 (MQ=255)
                                                                              cccGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTgg                                                                                                                        <  8:289785/97‑1 (MQ=255)
                                                                              cccGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTgg                                                                                                                        >  7:289785/1‑97 (MQ=255)
                                                                                  gAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTg                                                                >  3:52449/1‑149 (MQ=255)
                                                                                  gAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTg                                                                <  2:144606/149‑1 (MQ=255)
                                                                                   aGCTGGCCGAATACACCCGCGAACAGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTgg                                                               <  6:230620/149‑1 (MQ=255)
                                                                                       gcccGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGAc                                                           >  3:5685/3‑149 (MQ=255)
                                                                                        gCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGc                                                                             <  4:63345/130‑1 (MQ=255)
                                                                                        gCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGc                                                                             >  3:63345/1‑130 (MQ=255)
                                                                                        gCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACg                                                          >  2:204129/1‑149 (MQ=255)
                                                                                           gAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCtt                                                       <  8:189503/149‑1 (MQ=255)
                                                                                            aaTACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTc                                                      <  7:205815/149‑1 (MQ=255)
                                                                                                 acCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGtgtg                                                                                                                         <  5:80004/77‑1 (MQ=255)
                                                                                                 acCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGtgtg                                                                                                                         >  6:80004/1‑77 (MQ=255)
                                                                                                   ccGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCt                                               >  8:288302/1‑149 (MQ=255)
                                                                                                   ccGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCt                                               >  1:124489/1‑149 (MQ=255)
                                                                                                    cgcgAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTg                                              <  4:52449/149‑1 (MQ=255)
                                                                                                     gcgAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCg                                                                                                                 <  3:29060/81‑1 (MQ=255)
                                                                                                     gcgAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCg                                                                                                                 >  4:29060/1‑81 (MQ=255)
                                                                                                     gcgAACTGGCCCAGCAGGGTATGGCGCCTGCGATGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTg                                              >  2:295760/1‑148 (MQ=255)
                                                                                                       gAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGAt                                           <  6:275655/149‑1 (MQ=255)
                                                                                                           tGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAg                                        >  1:5618/1‑148 (MQ=255)
                                                                                                             gCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGc                                       <  2:67249/147‑1 (MQ=255)
                                                                                                             gCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGc                                       >  3:202242/1‑147 (MQ=255)
                                                                                                              cccAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAg                                    >  5:173292/1‑149 (MQ=255)
                                                                                                               ccAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCcgggcgg                                                                      <  3:95723/114‑1 (MQ=255)
                                                                                                               ccAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCcgggcgg                                                                      >  4:95723/1‑114 (MQ=255)
                                                                                                               ccAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAgg                                   >  6:174095/1‑149 (MQ=255)
                                                                                                               ccAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAgg                                   >  7:132037/1‑149 (MQ=255)
                                                                                                                 agcagGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCg                                 >  7:255589/1‑149 (MQ=255)
                                                                                                                    agGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGtt                              <  8:132037/149‑1 (MQ=255)
                                                                                                                      ggTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCt                                                                                        <  7:188677/89‑1 (MQ=255)
                                                                                                                      ggTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCt                                                                                        >  8:188677/1‑89 (MQ=255)
                                                                                                                       gTATGGGGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGGGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGc                           <  5:5610/149‑1 (MQ=255)
                                                                                                                          tGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATATGTAACAAGCTGGGGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTg                        <  2:207375/149‑1 (MQ=255)
                                                                                                                            gcgcCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGga                      <  7:244877/149‑1 (MQ=255)
                                                                                                                              gcCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCt                                               <  5:81956/122‑1 (MQ=255)
                                                                                                                              gcCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCt                                               >  6:81956/1‑122 (MQ=255)
                                                                                                                              gcCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGgag                     >  5:294151/1‑148 (MQ=255)
                                                                                                                                   cgcTGAGCTATCAGGTGAAAGTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGagaaga                 <  4:5685/147‑1 (MQ=255)
                                                                                                                                   cgcTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGagaaga                 <  1:295760/147‑1 (MQ=255)
                                                                                                                                   cgcTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGGGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGTTg               <  8:255589/149‑1 (MQ=255)
                                                                                                                                         gCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAg         <  4:71561/149‑1 (MQ=255)
                                                                                                                                           tATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAgcg       >  7:173815/1‑149 (MQ=255)
                                                                                                                                             tCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAgcgg      <  8:173815/148‑1 (MQ=255)
                                                                                                                                                ggTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGAt  >  4:93528/1‑149 (MQ=255)
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CAAGACCTTCATCGGCTCGTTCAACTTCGACCCGCGCTCAGTATTGTGGAACACCGAGGTCGGGGTACTGGTGGACAGCCCGGAGCTGGCCGAATACACCCGCGAACTGGCCCAGCAGGGTATGGCGCCTGCGCTGAGCTATCAGGTGAAACTGATAGGTAACAAGCTGGTGTGGGCGACCGAGGACAATGGCCAACGGCACGTGCTGACGTCTGAGCCGGGCGGGATCTGGCGACGCTTCAATGCCTGGATCAGCAAGGCGGTTGGCTTGGAGAAGATGCTATAGCGGCGAT  >  NC_002947/6026397‑6026689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑