| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 697,490 | T→C | 6.5% | intergenic (+417/‑334) | mmsA‑I → / → PP_16SD | methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 697,490 | 0 | T | C | 6.5% | 219.2 / 4.1 | 79 | intergenic (+417/‑334) | mmsA‑I/PP_16SD | methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (34/38); new base C (2/3); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTTATAATGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGC > NC_002947/697348‑697635 | ccTTATAATGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTa < 1:227529/149‑1 (MQ=255) cTTATAATGCGCCCCACTTCCTGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACTATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGTTGGTTGACGGCGCTTCCATGTGCTGTAt > 4:30653/1‑149 (MQ=21) ataATGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCACTTGGAAGCGCTGtcaa < 3:64579/147‑4 (MQ=25) ataATGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAAAGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGAGCTTCGAAGTGCTGTATGAt > 8:253582/1‑149 (MQ=255) aTGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATCCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTc < 4:10039/148‑1 (MQ=255) aTGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATCCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTc > 3:10039/1‑148 (MQ=255) tGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGTGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGc > 6:145800/1‑149 (MQ=255) cccACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTa < 5:89416/136‑1 (MQ=255) cccACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTa > 6:89416/1‑136 (MQ=255) aCTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCt < 5:219003/149‑1 (MQ=255) cTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCACTTGGAAGCGCTGtcaa < 3:62351/134‑4 (MQ=25) cTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCACTTGGAAGCGCTGtcaa > 4:62351/1‑131 (MQ=25) ttCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTAc < 1:199729/149‑1 (MQ=255) ttCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCACTTGGAAGCGCTGtcaa > 4:199038/1‑130 (MQ=25) ttCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCACTTGGAAGCGCTGtcaa < 3:199038/133‑4 (MQ=25) cAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACgag < 8:142189/149‑1 (MQ=255) cAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACgag < 1:58674/149‑1 (MQ=255) cAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACga < 5:145800/148‑1 (MQ=255) gACAACGGAACGCCAAAATCCTTGAAATTGAATTAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCTCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGAt < 7:253582/149‑1 (MQ=21) aaCGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTccc > 4:143786/1‑134 (MQ=255) aaCGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTccc < 3:143786/134‑1 (MQ=255) ggAACGACAAACTCCTTGAAATTCAATGAGTCAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATagcagc > 1:194208/1‑149 (MQ=255) ggAACGACAAACTACTTGAAATTCAATGAGTTAGACAAATCTGAAGCTGCTGTAAGGGCTACGATCAAATGATAGCCAGCGGTTGAGATGATGGTTGACAGCTCTTACAAGTGCTGTATGATTCGCCTCCCTCTACGAGAGATCGCat > 8:213420/1‑147 (MQ=21) gACAAACTCCTTTAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGcc < 3:30653/149‑1 (MQ=255) gACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGcc < 1:88768/149‑1 (MQ=255) aaaCTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAg > 4:148263/1‑149 (MQ=255) aaCTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAgt < 7:85583/149‑1 (MQ=255) cTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAgtgt > 6:164502/1‑149 (MQ=255) tCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACga > 1:282200/1‑126 (MQ=255) tCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACga < 2:282200/126‑1 (MQ=255) ttGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTg > 7:193837/1‑148 (MQ=255) ttGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATAGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTg > 6:74668/1‑148 (MQ=255) gAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGTGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGAAAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGaa < 7:213420/148‑1 (MQ=255) gAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTg > 3:190837/1‑146 (MQ=255) aaaTTCAATGAGTTAGACAATTATGAATGTGCTGTAATGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAg < 6:259913/148‑1 (MQ=255) aTGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAAc > 7:260109/1‑147 (MQ=255) aGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGt < 3:148263/148‑1 (MQ=255) aGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGttt > 1:157914/1‑130 (MQ=255) aGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGttt < 2:157914/130‑1 (MQ=255) gACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTtctc < 6:67418/148‑1 (MQ=255) aCAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCg > 7:172280/1‑148 (MQ=255) gAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACt > 5:216706/1‑149 (MQ=255) ggTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCa < 4:190837/149‑1 (MQ=255) gTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCGAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCa < 6:254141/148‑1 (MQ=255) gTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGa > 2:258357/1‑100 (MQ=255) gTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGa < 1:258357/100‑1 (MQ=255) tAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAAc > 3:92190/1‑138 (MQ=40) tAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAAc < 4:92190/138‑1 (MQ=40) aGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAAc < 8:172280/148‑1 (MQ=39) gggCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACga < 1:208817/83‑1 (MQ=255) gggCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACga > 2:208817/1‑83 (MQ=255) ggCTACGATCAAATGATCGCCAGCTGTTTAGATTATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCt < 6:273792/149‑1 (MQ=255) ggCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTa < 1:311754/113‑1 (MQ=39) ggCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTa > 2:311754/1‑113 (MQ=39) gCTACGATCAAATGATCTCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCtt < 5:216633/149‑1 (MQ=255) cTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTg > 6:58322/1‑149 (MQ=39) cGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGa < 5:74668/147‑1 (MQ=39) cGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACa < 8:193837/149‑1 (MQ=39) gATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACgaga > 6:139041/1‑78 (MQ=255) gATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACgaga < 5:139041/78‑1 (MQ=255) cAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGAGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGct > 8:46861/1‑149 (MQ=38) aaaTGATCGCCAGCGGTTGAGATGATGGTTCACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGAGAGCCAAGTGTTTGAAGCTAAACGAGTTTCACGCAAAAAACTTAAAAATAAACTCTAGACAGGct > 3:62145/1‑148 (MQ=11) aaTGTTCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCATGTGTTTGAAGCTAAACGAGTTTCTCGCAATAAACTTCAAAAt < 1:143916/131‑1 (MQ=255) aaTGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGAGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGATTCTCGCAAAAAACTACAAAAt > 2:143916/1‑131 (MQ=255) aTGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCACAATAAACGCTTGACAGGCTCTg < 7:46861/149‑1 (MQ=37) aTGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGctct > 2:200142/1‑148 (MQ=37) aTCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAg < 5:58322/148‑1 (MQ=37) gCCAGCTGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGaaa < 3:23313/149‑1 (MQ=21) cGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTa < 2:194208/149‑1 (MQ=32) gTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCg > 2:190947/1‑149 (MQ=32) aCAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGtt > 5:68614/1‑148 (MQ=32) aGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGtt > 8:140243/1‑146 (MQ=32) cgcTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCATCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTa < 7:232944/127‑1 (MQ=17) cgcTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTa > 8:232944/1‑127 (MQ=32) gcTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGAc > 6:40661/1‑148 (MQ=32) ttCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGa > 3:135835/1‑148 (MQ=32) cAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAg > 1:172222/1‑149 (MQ=32) cAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAg > 2:197359/1‑149 (MQ=32) aaGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGc < 7:140243/149‑1 (MQ=32) | CCTTATAATGCGCCCCACTTCCAGCGACAACGGAACGACAAACTCCTTGAAATTCAATGAGTTAGACAATTCTGAAGGTGCTGTAAGGGCTACGATCAAATGATCGCCAGCGGTTGAGATGATGGTTGACAGCGCTTCCAAGTGCTGTATGATTCGCCTCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGC > NC_002947/697348‑697635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |