| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 733,244 | A→T | 7.5% | intergenic (+219/‑144) | clpB → / → PP_t07 | chaperone protein ClpB/tRNA‑Asn |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 733,244 | 0 | A | T | 7.5% | 199.2 / 5.4 | 67 | intergenic (+219/‑144) | clpB/PP_t07 | chaperone protein ClpB/tRNA‑Asn |
| Reads supporting (aligned to +/- strand): ref base A (28/34); new base T (3/2); total (31/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
TTTCGGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTTCCGC > NC_002947/733098‑733392 | tttCGGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACaaa > 6:144542/1‑149 (MQ=255) tCGGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAAt > 2:44975/1‑148 (MQ=255) ggCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGt < 2:250916/149‑1 (MQ=255) tttGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGt > 1:117882/1‑149 (MQ=255) ccAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTtgaat > 5:285618/1‑148 (MQ=255) cAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACTGATTTGTAAGTtgttttg < 7:79297/149‑6 (MQ=255) cAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTtgaatga < 7:74447/149‑1 (MQ=255) ggggTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGaaaaaaa < 7:115976/149‑1 (MQ=255) aCCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGtt < 2:135713/149‑1 (MQ=255) aCCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGt < 4:145663/148‑1 (MQ=255) cGCCTGAAATTTTTGAAATTTTTGCTTGCAACAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTg > 1:25614/1‑148 (MQ=255) cGCCTGAAATTTTTGAAATTTTTGCTGGCATCTAATTTATAGTGCCCCTAATATACGCCGCGATGTAAGGCACTAAGCGAAAAACCACCAACATCTGTGATCTCAAAACA‑ACTT‑ACAAATCAGAAAGATGAATGAAAAAAAGTGGTTg > 5:250361/1‑148 (MQ=255) atttttgaaatttttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCaaa < 1:44975/149‑1 (MQ=255) aatttttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACgaagaa > 4:107156/1‑149 (MQ=255) tttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGt < 3:107156/148‑1 (MQ=255) tgcATCAAATTTAGAGTGCCCCTAATATAAGCCGCGTTGTCAGTCACTAAGCGAAACACCAGCAAAATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTTAATGAAAAAAAGTGGTTGACAAGAAAAACGATTAATTTAGAATa < 6:250361/148‑1 (MQ=255) cATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTtg < 6:94508/102‑1 (MQ=255) cATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTtg > 5:94508/1‑102 (MQ=255) cATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGcc > 8:129554/1‑149 (MQ=255) aTCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCg > 6:161799/1‑149 (MQ=255) tCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCgg > 1:317571/1‑149 (MQ=255) tCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCgg > 5:229074/1‑149 (MQ=255) aaaTTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGc < 2:317571/148‑1 (MQ=255) tttAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCt > 2:314869/1‑147 (MQ=255) tAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTcag < 6:285618/148‑1 (MQ=255) ccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAc < 2:25614/149‑1 (MQ=255) ccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAc > 5:263238/1‑149 (MQ=255) gccgcGTAGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCg > 2:288959/1‑148 (MQ=255) ccgcGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaa < 6:263238/149‑1 (MQ=255) ccgcGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaa < 5:161799/149‑1 (MQ=255) gTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAGACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaagaa > 1:232705/1‑149 (MQ=255) aGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATa > 4:154152/1‑107 (MQ=255) aGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATa < 3:154152/107‑1 (MQ=255) aGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa < 7:129554/148‑1 (MQ=255) aGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTa > 6:5828/1‑146 (MQ=255) ggCACTAAGCGAAACACCATCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAATAATGTAGAATAGCCGGCCTCAGCAGCGACAGCGCGAAAGCGAAGAAGCTAAaga < 8:266320/149‑1 (MQ=255) aCTAAGCGAAACACCAGCAACATCGGAGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTc > 1:4582/1‑149 (MQ=255) cTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTcc < 2:176765/149‑1 (MQ=255) aGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCg > 4:85060/1‑147 (MQ=255) gAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTTGACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGc > 1:52061/1‑149 (MQ=255) gAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGc < 2:52061/148‑1 (MQ=255) acCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAacac > 8:175879/1‑149 (MQ=255) cAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAg > 2:145988/1‑149 (MQ=255) gCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAg > 2:244456/1‑138 (MQ=255) gCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAg < 1:244456/138‑1 (MQ=255) aCATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGGCCGAAGCGAACACAGTCTTc < 2:117882/149‑1 (MQ=255) aTCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGTTTGACAAGCAAAACGAAGAATGTAGAATAGcc < 2:216940/85‑1 (MQ=255) aTCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCg > 7:12619/1‑148 (MQ=255) aTCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTAAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGcc > 1:216940/1‑85 (MQ=255) tCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGaa < 5:72650/131‑1 (MQ=255) tCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGaa > 6:72650/1‑131 (MQ=255) tCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTa < 1:314869/148‑1 (MQ=255) tCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTAc < 8:12619/149‑1 (MQ=255) tattca‑acTT‑ACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 1:186439/145‑1 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCg > 5:44579/1‑147 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 6:229074/149‑1 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 3:85060/149‑1 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 1:288959/149‑1 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 7:72156/149‑1 (MQ=255) aaaaCA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa < 2:232705/149‑1 (MQ=255) attca‑acTT‑ACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAag > 6:130729/4‑149 (MQ=255) ttca‑acTT‑ACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGaa > 2:186439/3‑147 (MQ=255) ttca‑acTT‑ACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAagt > 6:39828/3‑149 (MQ=255) ca‑acTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAagttc < 6:44579/149‑1 (MQ=255) tt‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGa > 4:16507/1‑130 (MQ=255) tt‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGa < 3:16507/130‑1 (MQ=255) aCAAATCAGTAAGTTTAATGAAAAAAAGTGGTTGACAATCAAAACGAAGAATTTAGAATAGCCTTCATCATAAGCGACAACGCGAAATCGAAGAAGCTAAAGAGTCCGAAg < 6:217344/111‑1 (MQ=255) cAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTTCcg < 5:144542/149‑1 (MQ=255) aaaTCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaagaa < 1:52750/93‑1 (MQ=255) aaaTCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaagaa > 2:52750/1‑93 (MQ=255) aaaTCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTTCcgc < 5:5828/149‑1 (MQ=255) | TTTCGGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACA‑ACTT‑ACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTTCCGC > NC_002947/733098‑733392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |