Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 953,554 T→A 9.8% Y121* (TAT→TAA) ‡ cyoC → cytochrome bo terminal oxidase subunit III

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947953,5540TA 9.8% 167.2 / 7.0 61Y121* (TAT→TAA) ‡cyoCcytochrome bo terminal oxidase subunit III
Reads supporting (aligned to +/- strand):  ref base T (27/28);  new base A (3/3);  total (30/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.46e-01

GCTGTTGAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATCAACAAGCACG  >  NC_002947/953408‑953702
                                                                                                                                                   |                                                                                                                                                    
gCTGTTGAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGCAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCGGGGACCTTCCTGTTCGGCTGCAGGCTTCATCGCGATGGAAATCTAt                                                                                                                                                      <  1:18460/148‑1 (MQ=255)
gCTGTTGAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGa                                                                                                                                                    >  6:311071/1‑149 (MQ=255)
gCTGTTGAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGa                                                                                                                                                    <  5:311071/149‑1 (MQ=255)
      gAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTcc                                                                                                                                               <  3:267989/148‑1 (MQ=255)
            cTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAACTCATAGATTTCCATcgcga                                                                                                                                        <  6:85606/149‑5 (MQ=255)
             tGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGTTGAAGGCTTCATCGCTATTGAAATCTATGCGTTCCATCAcat                                                                                                                                        >  4:37974/1‑146 (MQ=255)
               ttCCTGCTGCTGTCCTCGATCACCTTCGGGTTCGCAATGCTGAAGAAGTTCGATTGCAAGAAAGCATGTGTACTGGGCTGTTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTGATCGCGATGGAAATCTATGAGTTACATCACCTGAt                                                                                                                                     <  3:29048/149‑1 (MQ=255)
                     ctgctgTCCTCGATCACCTTCGGCGTCGCCATGCTGAAGATGTTCGAAGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGa                                                                                                                               <  6:269162/149‑1 (MQ=255)
                      tgctgTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAg                                                                                                                              <  5:258946/149‑1 (MQ=255)
                           tCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCg                                                                                                                                >  8:274677/1‑142 (MQ=255)
                           tCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCg                                                                                                                                <  7:274677/142‑1 (MQ=255)
                                 aTCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGccc                                                                                                                   <  4:71991/149‑1 (MQ=255)
                                  tCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTACATCACCTGATCAGCGAGGGCTTCGGCCcg                                                                                                                  >  4:76147/1‑149 (MQ=255)
                                    aCCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCcgca                                                                                                                <  4:220282/149‑1 (MQ=255)
                                      cTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCAcc                                                                                                                                         >  1:111812/1‑122 (MQ=255)
                                      cTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCAcc                                                                                                                                         <  2:111812/122‑1 (MQ=255)
                                      cTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCcgcagc                                                                                                              >  8:16582/1‑149 (MQ=255)
                                         cGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCcgcagcg                                                                                                             <  6:225130/147‑1 (MQ=255)
                                           gCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGt                                                                                                         <  7:16582/149‑1 (MQ=255)
                                                gCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCt                                                                                                     <  8:128931/148‑1 (MQ=255)
                                                        gAAGATGTTCGATGGCAAGAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTc                                                                                                                        >  2:258703/1‑120 (MQ=255)
                                                        gAAGATGTTCGATGGCAAGAAGCACGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTc                                                                                                                        <  1:258703/120‑1 (MQ=255)
                                                                  gATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGc                                                                                  >  6:84640/1‑149 (MQ=255)
                                                                       cAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTgg                                                                             <  8:228699/149‑1 (MQ=255)
                                                                         aGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTggta                                                                           <  3:37974/149‑1 (MQ=255)
                                                                                 ggTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCa                                                                   >  2:79335/1‑149 (MQ=255)
                                                                                  gtgtACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCAc                                                                  >  5:114162/1‑149 (MQ=255)
                                                                                   tgtACTGGGCTGGTTGGCTGTGACCTTGCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTATCCACg                                                                 <  7:137839/149‑1 (MQ=255)
                                                                                      aCTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTc                                                              >  4:158877/1‑149 (MQ=255)
                                                                                      aCTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTc                                                              >  4:163212/1‑149 (MQ=255)
                                                                                          ggCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGc                                                           <  1:79335/148‑1 (MQ=255)
                                                                                          ggCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCa                                                          >  2:210072/1‑149 (MQ=255)
                                                                                          ggCTGGTTGGCTGTGACCTTCATGTTAGCTGCAGGCTTCATAGCGATGGAAATCTATTAGTTCCATAACCTTATAAGATAGGGCTTATGCACGAATAGCAGTGGATTCATTTCGGGCTTATTCGCCCTGGTAGGTACACACGGTCTGCa                                                          >  4:74641/1‑149 (MQ=255)
                                                                                           gCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCAc                                                         <  8:204263/149‑1 (MQ=255)
                                                                                            cTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGcc                                                                                 >  3:265888/1‑124 (MQ=255)
                                                                                            cTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGcc                                                                                 <  4:265888/124‑1 (MQ=255)
                                                                                              ggTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGt                                                       >  8:258799/1‑148 (MQ=255)
                                                                                               gTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGa                                                     >  2:141662/1‑149 (MQ=255)
                                                                                                  ggCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGActg                                                  >  4:117418/1‑149 (MQ=255)
                                                                                                              ccTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGAt                                        <  3:76147/147‑1 (MQ=255)
                                                                                                                tGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGcttctt                                                                                     >  3:101229/1‑100 (MQ=255)
                                                                                                                tGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGcttctt                                                                                     <  4:101229/100‑1 (MQ=255)
                                                                                                                tGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTc                                            >  6:107403/1‑141 (MQ=255)
                                                                                                                tGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTc                                            <  5:107403/141‑1 (MQ=255)
                                                                                                                  ttCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGa                                   <  6:114162/148‑1 (MQ=255)
                                                                                                                  ttCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGAt                                  >  8:120895/1‑149 (MQ=255)
                                                                                                                        tGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCaa                             >  4:89840/1‑149 (MQ=255)
                                                                                                                        tGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCCGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCaa                             >  5:177109/1‑149 (MQ=255)
                                                                                                                           aGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCa                          >  1:113710/1‑149 (MQ=255)
                                                                                                                               ttCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTgg                                                                             >  2:216688/1‑94 (MQ=255)
                                                                                                                               ttCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTgg                                                                             <  1:216688/94‑1 (MQ=255)
                                                                                                                                tcctcccgATTGAAATATATGAGTTACATCACCTGAACAGCGAGGGCATCCGCCCCCAGCGCACTGGCTTCCTGACGGGCGTCTTCGCCCTGGTAGGTACCCACGCACTGCAAGAGACTGATGGTCTGATCTGCATGGCAATCatgat                      >  4:183153/7‑148 (MQ=255)
                                                                                                                                    ggtgATGGAACTCATAGATTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGAc                                                    <  4:177529/111‑1 (MQ=255)
                                                                                                                                    ggtgATGGAACTCATAGATTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGAc                                                    >  3:177529/4‑114 (MQ=255)
                                                                                                                                     gtgATGGAACTCATAGATTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGa                                   >  7:287826/3‑130 (MQ=255)
                                                                                                                                     gtgATGGAACTCATAGATTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGa                                   <  8:287826/128‑1 (MQ=255)
                                                                                                                                     gtgATGGAACTCATAGATTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTAc                  >  2:78958/3‑147 (MQ=255)
                                                                                                                                     gcgATGGAAATCTATGAGTTCCATCACCCGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCa                <  6:177109/149‑1 (MQ=255)
                                                                                                                                      cgATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTAc                  >  5:190474/1‑146 (MQ=255)
                                                                                                                                         tGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATc            <  1:229971/149‑1 (MQ=255)
                                                                                                                                            aaaTCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATcaac         <  5:84640/149‑1 (MQ=255)
                                                                                                                                                 tATTAGTTCCATCACCTGATCAGCGAGTGCTTCGGCCCGCATCGCAGTGGCTTCCTGTCGTGCTTCTTCGCCCTTGTAGGTACCCACGGTCTTCACGTGACTTCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATCAACAAGc     <  3:74641/148‑1 (MQ=255)
                                                                                                                                                   tGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCGGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATCAACAAGCACg  >  2:229093/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCTGTTGAAACGCTGTTCCTGCTGCTGTCCTCGATCACCTTCGGCTTCGCCATGCTGAAGATGTTCGATGGCAAGAAAGCAGGTGTACTGGGCTGGTTGGCTGTGACCTTCCTGTTCGGTGCAGGCTTCATCGCGATGGAAATCTATGAGTTCCATCACCTGATCAGCGAGGGCTTCGGCCCGCAGCGCAGTGGCTTCCTGTCGGGCTTCTTCGCCCTGGTAGGTACCCACGGTCTGCACGTGACTGCTGGTCTGATCTGGATGGCAATCATGATGTACCAGATCAACAAGCACG  >  NC_002947/953408‑953702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: