| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,045,611 | T→C | 5.8% | N923D (AAT→GAT) | PP_0906 ← | RND family multidrug transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,045,611 | 0 | T | C | 5.8% | 258.6 / 2.4 | 85 | N923D (AAT→GAT) | PP_0906 | RND family multidrug transporter |
| Reads supporting (aligned to +/- strand): ref base T (39/41); new base C (2/3); total (41/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAG > NC_002947/1045470‑1045755 | cTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAAc > 6:146547/1‑149 (MQ=255) ccTGCCCCGCTTGCCAGAATCAGCCGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGACTCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACt < 1:237212/149‑1 (MQ=255) cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGAtt > 3:12089/1‑139 (MQ=255) cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGAtt < 4:12089/139‑1 (MQ=255) cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGc < 6:173459/142‑1 (MQ=255) cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGc > 5:173459/1‑142 (MQ=255) cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTc > 6:324698/1‑148 (MQ=255) gCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcgac > 2:164181/1‑149 (MQ=255) ccccGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCACTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcga < 2:212759/147‑1 (MQ=255) ccGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcgacga > 6:123381/1‑148 (MQ=255) gCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGa < 7:277081/148‑1 (MQ=255) ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGTCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATa < 4:208152/149‑1 (MQ=255) ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctac < 5:167273/149‑5 (MQ=255) cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc > 3:166993/1‑149 (MQ=255) cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc > 3:112476/1‑149 (MQ=255) aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc > 5:5124/1‑149 (MQ=255) aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc < 7:39385/149‑1 (MQ=255) gAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCg > 1:16327/1‑149 (MQ=255) tCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTg < 7:24166/122‑1 (MQ=255) tCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTg > 8:24166/1‑122 (MQ=255) gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGaa < 2:251778/124‑1 (MQ=255) gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGaa > 1:251778/1‑124 (MQ=255) gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAg > 4:36934/1‑136 (MQ=255) gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttg > 3:25016/1‑149 (MQ=255) gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAg < 3:36934/136‑1 (MQ=255) cGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgc < 5:20401/149‑1 (MQ=255) cATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATaa < 5:324698/149‑1 (MQ=255) aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc > 7:201323/1‑128 (MQ=255) aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc > 7:257948/1‑128 (MQ=255) aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc < 8:257948/134‑7 (MQ=255) aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc < 8:201323/134‑7 (MQ=255) cGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGccc > 3:4329/1‑148 (MQ=255) gAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGa > 7:202076/1‑149 (MQ=255) acCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCaa > 1:81932/1‑149 (MQ=255) ccATAGCCGCAGTTGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt < 1:109542/149‑1 (MQ=255) ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt < 1:164181/149‑1 (MQ=255) ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt < 6:5124/149‑1 (MQ=255) ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt < 2:15277/149‑1 (MQ=255) gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct < 3:202193/125‑1 (MQ=255) gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct > 4:202193/1‑125 (MQ=255) cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt > 1:84528/1‑142 (MQ=255) cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt < 2:84528/142‑1 (MQ=255) gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt > 2:247902/1‑138 (MQ=255) gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt < 1:247902/138‑1 (MQ=255) tcaGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg < 5:146547/149‑1 (MQ=255) gCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGaa < 5:282551/85‑1 (MQ=255) gCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGaa > 6:282551/1‑85 (MQ=255) cACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgtg > 4:113339/1‑148 (MQ=255) aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt < 4:130836/146‑1 (MQ=255) aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt > 3:130836/1‑146 (MQ=255) aaTGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCg < 4:25016/149‑1 (MQ=255) aTGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGa < 2:26739/149‑1 (MQ=255) gCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacac < 2:16327/149‑1 (MQ=255) ccGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc < 4:99647/141‑1 (MQ=255) ccGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc > 3:99647/1‑141 (MQ=255) gctgctTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAGCATACCGTGCTTGCTGAGAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacacagc > 3:18158/1‑147 (MQ=255) ctTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCACATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAg > 1:206621/1‑148 (MQ=255) tCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg < 1:44340/117‑1 (MQ=255) tCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg > 2:44340/1‑117 (MQ=255) cTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGaa > 7:217928/1‑147 (MQ=255) a‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCTTGCTCGACACACCCAGGAACAGCgg < 4:166993/149‑1 (MQ=255) cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc < 4:239909/123‑1 (MQ=255) cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc > 3:239909/1‑123 (MQ=255) gcgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgc < 2:81932/148‑1 (MQ=255) cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc < 5:123381/149‑1 (MQ=255) cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc < 2:206621/149‑1 (MQ=255) acTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca > 2:145819/1‑148 (MQ=255) tCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca > 7:269381/1‑146 (MQ=255) aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg < 5:173672/102‑1 (MQ=255) aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg > 6:173672/1‑102 (MQ=255) aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt < 8:217928/149‑1 (MQ=255) gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc > 7:136562/1‑103 (MQ=255) gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc < 8:136562/103‑1 (MQ=255) gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATg > 4:109104/1‑148 (MQ=255) ccACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa < 3:109104/149‑1 (MQ=255) cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa > 8:51450/1‑148 (MQ=255) cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa < 8:251778/148‑1 (MQ=255) cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa > 7:251778/1‑148 (MQ=255) aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt > 2:196345/1‑144 (MQ=255) aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt < 1:196345/144‑1 (MQ=255) cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg < 5:260172/131‑1 (MQ=255) cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg > 6:260172/1‑131 (MQ=255) tCGCGTAGCTGATTGGCGAACTCGACGATCAGTATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa < 6:79460/94‑1 (MQ=255) tCGCGTAGCTGATTGGCGAACTCGACGATCAGGAAACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa > 5:79460/1‑94 (MQ=255) cgTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGt < 8:269381/149‑1 (MQ=255) gCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCAc < 3:113339/148‑1 (MQ=255) gATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAg > 8:36312/1‑148 (MQ=255) | CTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAG > NC_002947/1045470‑1045755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |