Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,045,618 C→T 6.4% E920E (GAG→GAA)  PP_0906 ← RND family multidrug transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,045,6180CT 6.4% 236.3 / 3.9 78E920E (GAG→GAA) PP_0906RND family multidrug transporter
Reads supporting (aligned to +/- strand):  ref base C (35/38);  new base T (2/3);  total (37/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.27e-01

CTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAAC  >  NC_002947/1045470‑1045765
                                                                                                                                                     |                                                                                                                                                   
cTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAAc                                                                                                                                                     >  6:146547/1‑149 (MQ=255)
  ccTGCCCCGCTTGCCAGAATCAGCCGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGACTCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACt                                                                                                                                                    <  1:237212/149‑1 (MQ=255)
   cTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTc                                                                                                                                                   >  6:324698/1‑148 (MQ=255)
     gCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcgac                                                                                                                                                >  2:164181/1‑149 (MQ=255)
      ccccGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCACTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcga                                                                                                                                                 <  2:212759/147‑1 (MQ=255)
        ccGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcgacga                                                                                                                                              >  6:123381/1‑148 (MQ=255)
              gCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGa                                                                                                                                        <  7:277081/148‑1 (MQ=255)
               ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGTCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATa                                                                                                                                      <  4:208152/149‑1 (MQ=255)
               ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctac                                                                                                                                      <  5:167273/149‑5 (MQ=255)
                cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc                                                                                                                                     >  3:166993/1‑149 (MQ=255)
                cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc                                                                                                                                     >  3:112476/1‑149 (MQ=255)
                 aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc                                                                                                                                    <  7:39385/149‑1 (MQ=255)
                 aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc                                                                                                                                    >  5:5124/1‑149 (MQ=255)
                  gAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCg                                                                                                                                   >  1:16327/1‑149 (MQ=255)
                        gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAg                                                                                                                                          >  4:36934/1‑136 (MQ=255)
                        gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttg                                                                                                                             >  3:25016/1‑149 (MQ=255)
                        gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAg                                                                                                                                          <  3:36934/136‑1 (MQ=255)
                         cGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgc                                                                                                                            <  5:20401/149‑1 (MQ=255)
                               cATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATaa                                                                                                                      <  5:324698/149‑1 (MQ=255)
                                aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                    <  8:201323/134‑7 (MQ=255)
                                aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                    <  8:257948/134‑7 (MQ=255)
                                aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                    >  7:257948/1‑128 (MQ=255)
                                aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                    >  7:201323/1‑128 (MQ=255)
                                    cGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGccc                                                                                                                  >  3:4329/1‑148 (MQ=255)
                                     gAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGa                                                                                                                >  7:202076/1‑149 (MQ=255)
                                         acCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCaa                                                                                                            >  1:81932/1‑149 (MQ=255)
                                          ccATAGCCGCAGTTGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           <  1:109542/149‑1 (MQ=255)
                                          ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           <  6:5124/149‑1 (MQ=255)
                                          ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           <  1:164181/149‑1 (MQ=255)
                                          ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           <  2:15277/149‑1 (MQ=255)
                                                  gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct                                                                                                                           >  4:202193/1‑125 (MQ=255)
                                                  gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct                                                                                                                           <  3:202193/125‑1 (MQ=255)
                                                   cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt                                                                                                         >  1:84528/1‑142 (MQ=255)
                                                   cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt                                                                                                         <  2:84528/142‑1 (MQ=255)
                                                     gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           >  2:247902/1‑138 (MQ=255)
                                                     gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                           <  1:247902/138‑1 (MQ=255)
                                                            tcaGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                         <  5:146547/149‑1 (MQ=255)
                                                                cACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgtg                                                                                      >  4:113339/1‑148 (MQ=255)
                                                                 aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt                                                                                       <  4:130836/146‑1 (MQ=255)
                                                                 aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt                                                                                       >  3:130836/1‑146 (MQ=255)
                                                                               aaTGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCg                                                                      <  4:25016/149‑1 (MQ=255)
                                                                                aTGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGa                                                                     <  2:26739/149‑1 (MQ=255)
                                                                                   gCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacac                                                                  <  2:16327/149‑1 (MQ=255)
                                                                                    ccGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                         >  3:99647/1‑141 (MQ=255)
                                                                                    ccGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                         <  4:99647/141‑1 (MQ=255)
                                                                                      gctgctTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAGCATACCGTGCTTGCTGAGAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacacagc                                                               >  3:18158/1‑147 (MQ=255)
                                                                                          ctTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCACATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAg                                                            >  1:206621/1‑148 (MQ=255)
                                                                                            tCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                         <  1:44340/117‑1 (MQ=255)
                                                                                            tCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                         >  2:44340/1‑117 (MQ=255)
                                                                                              cTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGaa                                                         >  7:217928/1‑147 (MQ=255)
                                                                                                  a‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCTTGCTCGACACACCCAGGAACAGCgg                                                   <  4:166993/149‑1 (MQ=255)
                                                                                                       cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                         <  4:239909/123‑1 (MQ=255)
                                                                                                       cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                         >  3:239909/1‑123 (MQ=255)
                                                                                                           gcgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgc                                            <  2:81932/148‑1 (MQ=255)
                                                                                                            cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc                                          <  5:123381/149‑1 (MQ=255)
                                                                                                            cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc                                          <  2:206621/149‑1 (MQ=255)
                                                                                                                 acTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca                                      >  2:145819/1‑148 (MQ=255)
                                                                                                                   tCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca                                      >  7:269381/1‑146 (MQ=255)
                                                                                                                     aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg                                                                                >  6:173672/1‑102 (MQ=255)
                                                                                                                     aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg                                                                                <  5:173672/102‑1 (MQ=255)
                                                                                                                     aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                 <  8:217928/149‑1 (MQ=255)
                                                                                                                       gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc                                                                             <  8:136562/103‑1 (MQ=255)
                                                                                                                       gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc                                                                             >  7:136562/1‑103 (MQ=255)
                                                                                                                       gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATg                                >  4:109104/1‑148 (MQ=255)
                                                                                                                        ccACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                              <  3:109104/149‑1 (MQ=255)
                                                                                                                         cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                              <  8:251778/148‑1 (MQ=255)
                                                                                                                         cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                              >  8:51450/1‑148 (MQ=255)
                                                                                                                         cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                              >  7:251778/1‑148 (MQ=255)
                                                                                                                          aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                 >  2:196345/1‑144 (MQ=255)
                                                                                                                          aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                 <  1:196345/144‑1 (MQ=255)
                                                                                                                               cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg                                         >  6:260172/1‑131 (MQ=255)
                                                                                                                               cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg                                         <  5:260172/131‑1 (MQ=255)
                                                                                                                                 tCGCGTAGCTGATTGGCGAACTCGACGATCAGTATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa                                                                            <  6:79460/94‑1 (MQ=255)
                                                                                                                                 tCGCGTAGCTGATTGGCGAACTCGACGATCAGGAAACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa                                                                            >  5:79460/1‑94 (MQ=255)
                                                                                                                                    cgTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGt                  <  8:269381/149‑1 (MQ=255)
                                                                                                                                        gCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCAc               <  3:113339/148‑1 (MQ=255)
                                                                                                                                           gATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAg            >  8:36312/1‑148 (MQ=255)
                                                                                                                                               ggCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCa       >  2:316417/1‑149 (MQ=255)
                                                                                                                                                    aCTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAAc  <  8:202076/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CTCCTGCCCCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGA‑TCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAAC  >  NC_002947/1045470‑1045765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑