Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,045,624 G→A 6.8% I918I (ATC→ATT)  PP_0906 ← RND family multidrug transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,045,6240GA 6.8% 221.8 / 4.0 73I918I (ATC→ATT) PP_0906RND family multidrug transporter
Reads supporting (aligned to +/- strand):  ref base G (32/36);  new base A (2/3);  total (34/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACGGGTCGC  >  NC_002947/1045478‑1045772
                                                                                                                                                  |                                                                                                                                                    
ccGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTcgacga                                                                                                                                                     >  6:123381/1‑148 (MQ=255)
      gCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGa                                                                                                                                               <  7:277081/148‑1 (MQ=255)
       ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGTCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATa                                                                                                                                             <  4:208152/149‑1 (MQ=255)
       ccAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctac                                                                                                                                             <  5:167273/149‑5 (MQ=255)
        cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc                                                                                                                                            >  3:112476/1‑149 (MQ=255)
        cAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAc                                                                                                                                            >  3:166993/1‑149 (MQ=255)
         aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc                                                                                                                                           <  7:39385/149‑1 (MQ=255)
         aGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATAcc                                                                                                                                           >  5:5124/1‑149 (MQ=255)
          gAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCg                                                                                                                                          >  1:16327/1‑149 (MQ=255)
                gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAg                                                                                                                                                 >  4:36934/1‑136 (MQ=255)
                gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttg                                                                                                                                    >  3:25016/1‑149 (MQ=255)
                gCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAg                                                                                                                                                 <  3:36934/136‑1 (MQ=255)
                 cGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgc                                                                                                                                   <  5:20401/149‑1 (MQ=255)
                       cATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATaa                                                                                                                             <  5:324698/149‑1 (MQ=255)
                        aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                           <  8:257948/134‑7 (MQ=255)
                        aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                           >  7:257948/1‑128 (MQ=255)
                        aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                           <  8:201323/134‑7 (MQ=255)
                        aTGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATCGTCGAGTTCGCCAATCAgctacgc                                                                                                                                           >  7:201323/1‑128 (MQ=255)
                            cGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGccc                                                                                                                         >  3:4329/1‑148 (MQ=255)
                             gAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGa                                                                                                                       >  7:202076/1‑149 (MQ=255)
                                 acCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCaa                                                                                                                   >  1:81932/1‑149 (MQ=255)
                                  ccATAGCCGCAGTTGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  <  1:109542/149‑1 (MQ=255)
                                  ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  <  6:5124/149‑1 (MQ=255)
                                  ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  <  1:164181/149‑1 (MQ=255)
                                  ccATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  <  2:15277/149‑1 (MQ=255)
                                          gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct                                                                                                                                  >  4:202193/1‑125 (MQ=255)
                                          gCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGtgcttgct                                                                                                                                  <  3:202193/125‑1 (MQ=255)
                                           cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt                                                                                                                >  1:84528/1‑142 (MQ=255)
                                           cAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGt                                                                                                                <  2:84528/142‑1 (MQ=255)
                                             gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  <  1:247902/138‑1 (MQ=255)
                                             gTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAAt                                                                                                                  >  2:247902/1‑138 (MQ=255)
                                                    tcaGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                                <  5:146547/149‑1 (MQ=255)
                                                        cACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgtg                                                                                             >  4:113339/1‑148 (MQ=255)
                                                         aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt                                                                                              >  3:130836/1‑146 (MQ=255)
                                                         aCCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGgt                                                                                              <  4:130836/146‑1 (MQ=255)
                                                                       aaTGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCg                                                                             <  4:25016/149‑1 (MQ=255)
                                                                        aTGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGa                                                                            <  2:26739/149‑1 (MQ=255)
                                                                           gCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacac                                                                         <  2:16327/149‑1 (MQ=255)
                                                                            ccGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                                >  3:99647/1‑141 (MQ=255)
                                                                            ccGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                                <  4:99647/141‑1 (MQ=255)
                                                                              gctgctTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGAAGCTGATTGGCGAACTCGACGATCAGCATACCGTGCTTGCTGAGAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGacacagc                                                                      >  3:18158/1‑147 (MQ=255)
                                                                                  ctTCCTCGATCGCTTCGCGCACACTCAGGCCACGCACATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAg                                                                   >  1:206621/1‑148 (MQ=255)
                                                                                    tCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                                <  1:44340/117‑1 (MQ=255)
                                                                                    tCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTgg                                                                                                >  2:44340/1‑117 (MQ=255)
                                                                                      cTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGaa                                                                >  7:217928/1‑147 (MQ=255)
                                                                                          aTCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCTTGCTCGACACACCCAGGAACAGCgg                                                          <  4:166993/149‑1 (MQ=255)
                                                                                              cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                                <  4:239909/123‑1 (MQ=255)
                                                                                              cTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGc                                                                                >  3:239909/1‑123 (MQ=255)
                                                                                                  gcgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgc                                                   <  2:81932/148‑1 (MQ=255)
                                                                                                   cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc                                                 <  5:123381/149‑1 (MQ=255)
                                                                                                   cgcACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgc                                                 <  2:206621/149‑1 (MQ=255)
                                                                                                        acTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca                                             >  2:145819/1‑148 (MQ=255)
                                                                                                          tCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCca                                             >  7:269381/1‑146 (MQ=255)
                                                                                                            aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg                                                                                       <  5:173672/102‑1 (MQ=255)
                                                                                                            aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATg                                                                                       >  6:173672/1‑102 (MQ=255)
                                                                                                            aGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                        <  8:217928/149‑1 (MQ=255)
                                                                                                              gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc                                                                                    <  8:136562/103‑1 (MQ=255)
                                                                                                              gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTc                                                                                    >  7:136562/1‑103 (MQ=255)
                                                                                                              gCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATg                                       >  4:109104/1‑148 (MQ=255)
                                                                                                               ccACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                                     <  3:109104/149‑1 (MQ=255)
                                                                                                                cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                                     >  8:51450/1‑148 (MQ=255)
                                                                                                                cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                                     <  8:251778/148‑1 (MQ=255)
                                                                                                                cACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGa                                     >  7:251778/1‑148 (MQ=255)
                                                                                                                 aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                        >  2:196345/1‑144 (MQ=255)
                                                                                                                 aCGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGAt                                        <  1:196345/144‑1 (MQ=255)
                                                                                                                      cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg                                                <  5:260172/131‑1 (MQ=255)
                                                                                                                      cATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAgcgcg                                                >  6:260172/1‑131 (MQ=255)
                                                                                                                        tCGCGTAGCTGATTGGCGAACTCGACGATCAGTATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa                                                                                   <  6:79460/94‑1 (MQ=255)
                                                                                                                        tCGCGTAGCTGATTGGCGAACTCGACGATCAGGAAACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCa                                                                                   >  5:79460/1‑94 (MQ=255)
                                                                                                                           cgTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGt                         <  8:269381/149‑1 (MQ=255)
                                                                                                                               gCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCAc                      <  3:113339/148‑1 (MQ=255)
                                                                                                                                  gATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAg                   >  8:36312/1‑148 (MQ=255)
                                                                                                                                      ggCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCa              >  2:316417/1‑149 (MQ=255)
                                                                                                                                           aCTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAAc         <  8:202076/149‑1 (MQ=255)
                                                                                                                                               gacgaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCAcc                     <  8:202187/133‑1 (MQ=255)
                                                                                                                                               gacgaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCAcc                     >  7:202187/1‑133 (MQ=255)
                                                                                                                                               gacgaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACgg       <  7:36312/147‑1 (MQ=255)
                                                                                                                                               gacgaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACGGGt     >  7:42998/1‑149 (MQ=255)
                                                                                                                                                acgaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACGGGTc    >  1:300254/1‑149 (MQ=255)
                                                                                                                                                  gaTCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACGGGTcgc  >  1:201849/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CCGCTTGCCAGAATCAGCGGCACCATGCCGAACACCATAGCCGCAGTGGTCATCAGCACCGGCCGCAGGCGAATGGCCGCTGCTTCCTCGATCGCTTCGCGCACACTCAGGCCACGCTCATCGCGTAGCTGATTGGCGAACTCGACGATCAGGATACCGTGCTTGCTGATAAGCCCGATCAATGTCACCAGCCCGACCTGGGTGTAGATGTTCATGCTCGACACACCCAGGAACAGCGGCAAAAGCGCGCCACAGATGGACAACGGCACTGTCACCAGAATCACCAACGGGTCGC  >  NC_002947/1045478‑1045772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑