| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,202,625 | C→G | 6.0% | R152G (CGC→GGC) | xcpY → | type II secretion pathway protein XcpY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,202,625 | 0 | C | G | 6.0% | 220.1 / 3.6 | 67 | R152G (CGC→GGC) | xcpY | type II secretion pathway protein XcpY |
| Reads supporting (aligned to +/- strand): ref base C (30/33); new base G (2/2); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
GTACCTTCGTCTGTTGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGCGGCAATTGGCCAAC > NC_002947/1202480‑1202767 | gTACCTTCGTCTGTTGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCa > 7:216293/1‑149 (MQ=255) tACCTTCGTCTGTTGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCAc < 6:166071/149‑1 (MQ=255) cTTCGTCTGTTGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCAcccc < 2:39204/149‑1 (MQ=255) ttGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGt < 8:214905/148‑1 (MQ=255) ggTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGc > 5:193401/1‑149 (MQ=255) gTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTAGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGCGCCAGGCTGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGct > 6:196236/1‑149 (MQ=255) tAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGctc < 3:178738/149‑1 (MQ=255) tGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTAc < 8:52504/149‑1 (MQ=255) cgcgTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACaaa < 2:23744/149‑1 (MQ=255) gcgTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAg < 8:95771/149‑1 (MQ=255) cagcagCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGctct > 1:60215/1‑139 (MQ=255) cagcagCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGctct < 2:60215/139‑1 (MQ=255) agcagcTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCtt < 7:145551/148‑1 (MQ=255) ggATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAg > 3:207293/1‑149 (MQ=255) gATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCg > 1:315980/1‑145 (MQ=255) gATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGaa < 6:193401/147‑1 (MQ=255) aTGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGAt < 1:236542/149‑1 (MQ=255) tGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGAt > 7:62363/1‑144 (MQ=255) tGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGAt < 8:62363/144‑1 (MQ=255) tGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGa > 2:109780/1‑147 (MQ=255) gCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAAGGCACCCCCgg > 7:76176/1‑111 (MQ=255) gCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAAGGCACCCCCgg > 7:71706/1‑111 (MQ=255) gCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAAGGCACCCCCgg < 8:71706/111‑1 (MQ=255) gCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAAGGCACCCCCgg < 8:76176/111‑1 (MQ=255) gCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACa < 2:75258/147‑1 (MQ=255) ccAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCAct < 5:93953/149‑1 (MQ=255) aaTGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGa > 5:124689/1‑137 (MQ=255) aaTGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGa < 6:124689/137‑1 (MQ=255) gCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCActggctg > 7:112863/1‑149 (MQ=255) ccccGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATg > 5:30714/1‑131 (MQ=255) ccccGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATg < 6:30714/131‑1 (MQ=255) gAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTg < 5:220737/149‑1 (MQ=255) gCTTGCAGTGGGTACGTTGCTTGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGGATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGAt < 5:196236/149‑1 (MQ=255) gCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGAt < 1:109780/149‑1 (MQ=255) gCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGAt > 1:132422/1‑149 (MQ=255) gACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTgg < 1:123227/149‑1 (MQ=255) ggTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTg > 2:209/1‑149 (MQ=255) cGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGt < 8:216293/149‑1 (MQ=255) gTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTg < 3:300431/144‑1 (MQ=255) gTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTg > 4:300431/1‑144 (MQ=255) gTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTg > 5:296484/1‑149 (MQ=255) tGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCg > 2:45950/1‑147 (MQ=255) tGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCg > 6:99147/1‑147 (MQ=255) gggCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTg < 2:275829/121‑1 (MQ=255) gggCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTg > 1:275829/1‑121 (MQ=255) agctgcagctgcTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTg < 4:272424/120‑1 (MQ=255) agctgcagctgcTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTg > 3:272424/1‑120 (MQ=255) gcagctgcTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTggg > 2:35514/1‑149 (MQ=255) cagctgcTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGc < 6:296484/149‑1 (MQ=255) cagctgcTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGC‑TGCGGCACGCCAcccaag < 1:209/147‑5 (MQ=255) tgctgcCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGtg > 6:195225/1‑149 (MQ=255) ctgcCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCTTGTCGCTCTACAAAGGCTTCGCCGAAGATGGACACGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGtgct > 1:22294/1‑149 (MQ=255) acATCAACCGAGCCAGGATGCGCCTGGCAATGGAAACGCACCACCGGCATGTCGCACTACAAAGGATTTGCCGAAGATGGCCAGGAGCACTGGATGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTCCGCAGtgatga > 4:273574/2‑147 (MQ=255) cATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGca > 3:114976/1‑148 (MQ=255) aTCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGc > 5:108057/1‑122 (MQ=255) aTCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGc < 6:108057/122‑1 (MQ=255) aCCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGa > 2:58124/1‑149 (MQ=255) gAGCCAGGATGCGCCTGGCAATGGCAACGCATCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAgg < 7:69738/144‑1 (MQ=255) gAGCCAGGATGCGCCTGGCAATGGCAACGCATCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAgg > 8:69738/1‑144 (MQ=255) ccAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCt < 4:114976/149‑1 (MQ=255) gATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGc < 2:315980/149‑1 (MQ=255) tGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGCgg < 1:35514/149‑1 (MQ=255) gcaatggcaaCGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGCGGCAATTgg < 5:99147/148‑1 (MQ=255) gcaatggcaaCGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGCGGCAATTGGc > 3:11239/1‑149 (MQ=255) tggcacCGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGGCCCGGGCGTCGCTGCGCGGCAATTGGCCacc > 8:54836/1‑147 (MQ=255) gcaaCGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCa < 6:38092/57‑1 (MQ=255) gcaaCGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCa > 5:38092/1‑57 (MQ=255) | GTACCTTCGTCTGTTGGTAGTGGCGCGTCAGCAGCTGGATGACTGGCGTGGCCAATGCCCCGAATGGGGCTTGCAGACGGTACGTTGCTGGGCGGAGCTGCAGCTGCTGCCATCACCCGAGCCAGGATGCGCCTGGCAATGGCAACGCACCCCCGGCATGTCGCTCTACAAAGGCTTGGCCGAAGATGGACAGGAGCACTGGCTGGCGTGGCCTGATGCCTTGGGTGGCGTGCCGCA‑GCCACCGTGGGCAGTGCTGCACAGGACGTCGCTGAGCGGCAATTGGCCAAC > NC_002947/1202480‑1202767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |