| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,504,067 | T→A | 7.8% | intergenic (+34/‑229) | rpsI → / → petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,504,067 | 0 | T | A | 7.8% | 209.2 / 6.6 | 76 | intergenic (+34/‑229) | rpsI/petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base T (36/33); new base A (2/4); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 | |||||||||||
CTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCAT > NC_002947/1503920‑1504212 | cTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCtt > 4:38398/1‑149 (MQ=255) ggCGCTCTGCGTCGTGCTGGCTACGTGACGCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGGCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCTTGCGTAAATACCGCTTCGTCAGTCGAAAAAAGCCCGGTTCCTTGGAAc < 1:129189/148‑1 (MQ=255) gcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCggg > 2:6271/1‑149 (MQ=255) gcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACCggg < 6:226258/149‑1 (MQ=255) cgtcgtGCTGGCTACGTCACCCGCGACTCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCAAGGAACCGGGCtt < 7:110317/146‑1 (MQ=255) tcgtGCTGGCTACGTCACGCTCGACGCTCGTGAAGTTTAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAACCCCGGTTCCAAGGAACCGGGCtttt‑‑ttc < 6:217527/149‑2 (MQ=255) tcgtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCtttt‑‑ttt > 7:174228/1‑149 (MQ=255) gtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCtttt‑‑tttt > 3:248515/1‑148 (MQ=255) tGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTa < 3:38398/149‑1 (MQ=255) ggCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑t > 3:226076/1‑149 (MQ=255) gCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑tt < 1:6271/149‑1 (MQ=255) cTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCACTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTg < 5:68842/149‑1 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTg > 8:28615/1‑148 (MQ=255) cGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGaa < 6:82354/148‑1 (MQ=255) gTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAAc > 6:253954/1‑148 (MQ=255) aCCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAAc < 6:139120/149‑1 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGc < 7:186120/136‑1 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGc > 8:186120/1‑136 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCt > 4:248054/1‑149 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAAc > 6:247119/1‑138 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAAc < 5:247119/138‑1 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGcagt > 1:184402/1‑149 (MQ=255) aaGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGcagtcagt < 6:286297/148‑1 (MQ=255) tGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGcc < 8:110903/148‑1 (MQ=255) aGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGc < 3:248054/148‑1 (MQ=255) cGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTg > 2:102147/1‑149 (MQ=255) aaGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCg > 2:305129/1‑149 (MQ=255) aGAAAGTGTGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATAACGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGc < 7:232012/149‑1 (MQ=255) gAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCa < 7:28615/149‑1 (MQ=255) aaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAAc > 4:297301/1‑118 (MQ=255) aaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAAc < 3:297301/118‑1 (MQ=255) aGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAg < 5:253954/149‑1 (MQ=255) cTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACg > 1:127575/1‑145 (MQ=255) cTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACg > 1:243289/1‑145 (MQ=255) tGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGa > 6:256590/1‑148 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATc < 2:127575/148‑1 (MQ=255) aaaGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTc < 2:226495/109‑1 (MQ=255) aaaGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTc > 1:226495/1‑109 (MQ=255) cgTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATATACGTAGATCAAGCAAAGCg > 3:35551/1‑149 (MQ=255) gTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGt > 4:213185/1‑149 (MQ=255) aGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTgg < 4:226076/148‑1 (MQ=255) cGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGtt > 4:261306/1‑149 (MQ=255) tCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGc > 1:136557/1‑149 (MQ=255) aGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGC‑TTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCg > 5:322483/1‑135 (MQ=255) aGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGC‑TTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCg < 6:322483/135‑1 (MQ=255) tCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTgg > 4:244477/1‑134 (MQ=255) tCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTgg < 3:244477/134‑1 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgg > 3:42509/1‑149 (MQ=255) aaGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg < 3:213185/149‑1 (MQ=255) gCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgggg > 2:155457/1‑148 (MQ=255) gCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGt < 1:305129/149‑1 (MQ=255) gTTAATACCGCTTCGGCATTCGAAAAAACCCCGGTTCCTTTGAACCGGGTTTCTCATTTTTACCCAATAATCTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCggg < 1:102147/148‑1 (MQ=255) ttAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAAt < 2:184402/149‑1 (MQ=255) aTACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCa < 1:155457/148‑1 (MQ=255) tcccGCTTCGGCAGTCGCAACAAGCCCGGTTCCGTGGCACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTCACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAACGCGTGGGTTGTCGCCCTTGCCGGGGTAATCAcc < 8:174228/147‑1 (MQ=255) aCCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCt > 7:41405/1‑149 (MQ=255) ccGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCtt < 2:55289/149‑1 (MQ=255) cGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGGTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTg > 2:114878/1‑149 (MQ=255) cGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTg > 1:239238/1‑149 (MQ=255) gCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGt < 5:256590/149‑1 (MQ=255) gCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAgtgt < 4:42509/149‑1 (MQ=255) cAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAgtgtg > 8:235479/1‑149 (MQ=255) gTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACGTTGTCAGtgtgtg > 6:31626/1‑149 (MQ=255) tCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGt < 3:172908/139‑1 (MQ=255) tCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGt > 4:172908/1‑139 (MQ=255) cGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGa > 6:140598/1‑149 (MQ=255) aaaGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGt < 7:235479/149‑1 (MQ=255) aaGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 5:140609/146‑1 (MQ=255) aaGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt > 6:140609/1‑146 (MQ=255) aGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGttt < 4:35551/149‑1 (MQ=255) gCCCGGTTCCAAGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGa < 3:195474/141‑1 (MQ=255) gCCCGGTTCCAAGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGa > 4:195474/1‑141 (MQ=255) cccGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCt > 8:65078/1‑149 (MQ=255) ccGGTTCCAAGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCt > 3:239831/1‑148 (MQ=255) gTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTAc > 3:61117/1‑148 (MQ=255) ttCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTCAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGGGTGTGGATTTGTTTCTTACCa < 5:295956/149‑1 (MQ=255) ccTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCAt > 1:294974/1‑148 (MQ=255) | CTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGGTTCCTTGGAACCGGGCTTTT‑‑TTTTTAGCC‑TTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCAT > NC_002947/1503920‑1504212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |