| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,631,095 | C→A | 5.2% | intergenic (+29/‑152) | PP_1430 → / → lepA | DegP‑like serine endoprotease/elongation factor 4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,631,095 | 0 | C | A | 5.2% | 282.6 / 3.5 | 87 | intergenic (+29/‑152) | PP_1430/lepA | DegP‑like serine endoprotease/elongation factor 4 |
| Reads supporting (aligned to +/- strand): ref base C (40/42); new base A (3/2); total (43/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
CCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTG > NC_002947/1630957‑1631239 | ccAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCCGAAGCTGCCCt < 8:112713/148‑1 (MQ=255) cAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGTCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATACGCAGTTTA‑GCAAGGCGAAAGGGCAGCTTCGGCTGcgcatt > 4:128274/1‑144 (MQ=255) cAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCttt > 5:298532/1‑149 (MQ=255) cAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCttt > 1:309795/1‑149 (MQ=255) aaGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCtttt > 2:34261/1‑149 (MQ=255) aaGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCCGAAGCTGCCCtttc < 8:276978/149‑2 (MQ=255) aGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCtttt > 5:2282/1‑148 (MQ=255) ggAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCttttt > 5:32312/1‑148 (MQ=255) ggAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTc < 3:33919/149‑1 (MQ=255) acttCACCTAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTCTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCa < 3:26103/146‑1 (MQ=255) aaTTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCAt < 6:32312/149‑1 (MQ=255) tCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGaa > 4:173049/1‑149 (MQ=255) cACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGaa < 6:77298/148‑1 (MQ=255) aCCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTAAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATc > 7:259404/1‑149 (MQ=255) ccGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAACCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCt < 5:296865/149‑1 (MQ=255) cGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCt > 7:220381/1‑148 (MQ=255) aaaTCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTca < 4:219251/149‑1 (MQ=255) aaaTCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTA‑GCAAGGCGAAAGGGCAGCGTCGGATGCCCTTTTTCATGAATCTTc > 3:292831/1‑148 (MQ=255) cAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGc > 8:213270/1‑149 (MQ=255) aaGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGcc > 6:173595/1‑149 (MQ=255) aGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCg < 5:254402/149‑1 (MQ=255) aCTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAAt < 6:298532/149‑1 (MQ=255) tGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATAACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGa > 8:167182/1‑149 (MQ=255) ccGAAGAATCGTTCGGTGTAGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCATGCTTGGTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGa < 5:286255/147‑1 (MQ=255) ccGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGcc < 5:213819/140‑1 (MQ=255) ccGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGcc > 6:213819/1‑140 (MQ=255) cGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTg < 2:260473/149‑1 (MQ=255) aagaaTCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTGATCACTTTCAAGCTTGCTGAATTAGCAGTTTC‑GCATGGCGAAAGGGCAGCTTCGGCTGCGCTTTTTGATGATTCTGCTCAATTGCGGGAATGATTggt > 4:16246/1‑147 (MQ=255) aaTCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCtgtg > 8:72182/1‑149 (MQ=255) gtgtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCtgtg < 6:310523/140‑1 (MQ=255) gtgtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCtgtg > 5:310523/1‑140 (MQ=255) tgtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGa < 3:173049/149‑1 (MQ=255) gtCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGa > 3:233242/1‑148 (MQ=255) tCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACa < 2:309795/149‑1 (MQ=255) aTGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGTATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACagag < 8:220381/149‑1 (MQ=255) aTGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTCTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACagag < 7:167182/149‑1 (MQ=255) cgcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGa < 1:220765/148‑1 (MQ=255) gcgTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAAt > 7:44787/1‑149 (MQ=255) aCTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTcc > 8:257144/1‑149 (MQ=255) cTGCGTCAGGGCCTTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTccc < 3:297945/149‑1 (MQ=255) cTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTccc < 5:173595/149‑1 (MQ=255) cTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTccc < 1:34261/149‑1 (MQ=255) cTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTccc < 8:259404/149‑1 (MQ=255) gCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCa > 5:141658/1‑148 (MQ=255) gCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCa > 7:115812/1‑148 (MQ=255) cGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCa < 8:174497/147‑1 (MQ=255) gggCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCca < 6:2282/149‑1 (MQ=255) ccAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCtt < 8:115812/148‑1 (MQ=255) cAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCtt > 2:234412/1‑147 (MQ=255) aGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAg < 8:44787/149‑1 (MQ=255) cTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGt < 5:73211/149‑1 (MQ=255) tcaCTTTCAAGCTTGCTGAATAAGCAGTTTCTGCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACaa > 1:193722/1‑149 (MQ=255) tcaCTTTCAAGCTTACTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACagag > 2:277741/1‑115 (MQ=255) aCTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAAtt < 3:16246/148‑1 (MQ=255) cTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCtgtg < 7:288093/97‑1 (MQ=255) cTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCtgtg > 8:288093/1‑97 (MQ=255) tttCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTccc > 7:273238/1‑149 (MQ=255) tttCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTccc > 8:12335/1‑149 (MQ=255) ttCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCg > 3:250217/1‑149 (MQ=255) cAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCgg < 2:193722/148‑1 (MQ=255) aaGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGc > 4:220852/1‑148 (MQ=255) ttGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTAttt > 7:156595/1‑149 (MQ=255) tGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTcac > 2:297699/1‑62 (MQ=255) tGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTcac < 1:297699/62‑1 (MQ=255) aaTAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTca > 2:265051/1‑59 (MQ=255) aaTAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTca < 1:265051/59‑1 (MQ=255) aaTAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTcgg < 3:220852/148‑1 (MQ=255) aaTAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTcg < 3:240091/147‑1 (MQ=255) aTAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTTCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTcggcg < 4:250217/149‑1 (MQ=255) aaGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCggcggg > 6:147793/1‑149 (MQ=255) aGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCggcgggc > 5:41740/1‑149 (MQ=255) cAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCg > 4:236796/1‑149 (MQ=255) cAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCg < 7:72182/149‑1 (MQ=255) tgaaaaaGGGCAGCCGAAGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAg > 2:269896/5‑149 (MQ=255) ggCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAg > 5:18704/1‑149 (MQ=255) gaaaaaGGGCAGCCGAAGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACACAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGc > 7:263340/4‑149 (MQ=255) aaaaGGGCAGCCGAAGCTGCCCTTTTTCTTGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCt > 1:177969/2‑149 (MQ=255) gCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGa < 1:234412/149‑1 (MQ=255) gCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGa < 7:213270/149‑1 (MQ=255) gCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGa < 3:236796/149‑1 (MQ=255) aGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTATAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgt > 4:176682/1‑149 (MQ=255) aGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgt < 8:156595/149‑1 (MQ=255) aGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgt < 6:18704/149‑1 (MQ=255) gCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTa < 3:37899/93‑1 (MQ=255) gCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTa > 4:37899/1‑93 (MQ=255) gCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgtg < 6:41740/149‑1 (MQ=255) gCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGAAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAgtg > 4:235557/1‑149 (MQ=255) | CCAAGGAATTCACCGAAATCGCCAAGGAACTGCCGAAGAATCGTTCCGTGTCGATGCGCGTACTGCGTCAGGGCCGTGCCAGCTTCATCACTTTCAAGCTTGCTGAATAAGCAGTTTC‑GCAAGGCGAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTG > NC_002947/1630957‑1631239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |