| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 217,051 | C→G | 6.4% | V7519V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 217,051 | 0 | C | G | 6.4% | 223.9 / 4.4 | 76 | V7519V (GTC→GTG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (35/36); new base G (3/2); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
AAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAACCAGG > NC_002947/216906‑217194 | aaGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACt > 6:319352/1‑149 (MQ=34) cggcgAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGccc < 3:96907/149‑1 (MQ=34) gagaTCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGa < 7:11288/149‑1 (MQ=34) tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAAc < 6:39519/149‑1 (MQ=34) aCCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGt < 5:8518/149‑1 (MQ=34) ccTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGt > 6:218919/1‑148 (MQ=34) cTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTc > 4:277320/1‑148 (MQ=34) cTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCt < 8:61357/149‑1 (MQ=34) cTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCt < 5:319352/149‑1 (MQ=34) ccATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTc > 2:20152/1‑149 (MQ=34) cATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCg < 2:23884/149‑1 (MQ=34) aTCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCgg < 3:231856/149‑1 (MQ=34) tGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAAc > 6:283439/1‑149 (MQ=34) aacaaAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGAccc < 4:173228/149‑1 (MQ=34) acaaAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCa > 1:71443/1‑141 (MQ=34) acaaAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCa < 2:71443/141‑1 (MQ=34) aaaGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCtgt > 4:134709/1‑149 (MQ=34) aTGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATc < 5:268173/149‑1 (MQ=33) tCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAa‑t > 6:86304/1‑149 (MQ=32) tCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAa‑t < 1:20152/149‑1 (MQ=32) acggtagcagtgcccacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAa‑tc > 7:195026‑M2/85‑148 (MQ=255) aaTCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCTGGACAACGTCTACGTCGGTAc < 3:177796/123‑1 (MQ=11) aaTCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCTGGACAACGTCTACGTCGGTAc > 4:177796/1‑123 (MQ=11) gcccacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATG‑TCGATCGCAACCGt > 3:242584‑M2/74‑149 (MQ=255) cccacggtgccgttggcaggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGtt > 1:230268‑M2/73‑149 (MQ=255) CCACAGTGCATTGACCTTCACGCTGAGCGAGCGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCg < 1:28030‑M1/95‑1 (MQ=255) CCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCg > 2:28030‑M1/1‑94 (MQ=255) CCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGtt < 6:33313‑M1/148‑1 (MQ=255) CCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTg > 5:21000‑M1/1‑149 (MQ=255) CCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTg < 2:216814‑M1/149‑1 (MQ=255) ccacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGGTCGCAACCGTTg > 8:282247‑M2/72‑149 (MQ=255) CACAGTGCATTGAACTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCGAACGGCTCCGTGGGCACTGCTACCGTCACTGCCCCAGACAACTTCTACGTCGGTAGCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTgg > 4:129148‑M1/1‑149 (MQ=255) cacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTg > 8:148202‑M2/71‑148 (MQ=255) cacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCCCAACCGTTg > 5:68932‑M2/71‑148 (MQ=255) acgttgccgttggccggcacggtgatgacggttttgcagtcgatcagcgttaaggtcaatgcactgtggTCACTGCTACCGTCACTGCCCCGGACAAGGTCTACGTCGGTACCAACGACCCTGTGATCAAa‑tcgat < 3:195062‑M2/67‑1 (MQ=255) acggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCTACCGTCACTGACCCGGACAACGTCGACGTCGGTACCAACGACCCTGTGATCAAa‑tcgat > 4:195062‑M2/70‑136 (MQ=255) CAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCg > 5:283439‑M1/1‑149 (MQ=255) ggtgccgttggccggcacggtgatgacggttctgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATG‑TCGATCGCAACCGTTggagg > 4:220513‑M2/68‑149 (MQ=255) gTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TAGATCGCAACCGTTggcggc > 2:46485/1‑149 (MQ=18) cATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGgcgc < 5:86304/148‑1 (MQ=35) ttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGAt < 8:195026‑M2/89‑1 (MQ=255) gACCTTCACGCTGAGCGA‑CTGCAAAACCGTCATCACCGTGCCGGCCTACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGAt < 7:276483/148‑1 (MQ=255) gACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATg > 6:105549/1‑149 (MQ=38) aCCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGt > 6:303017/1‑149 (MQ=39) aCCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGt < 5:235609/149‑1 (MQ=39) cacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGAAGGTGCGGATGTCGGCaa < 7:148202‑M2/97‑1 (MQ=255) cGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCATCGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATTCGATCGCAACCGTTGGCGGCGCGGATGTTGGCaa < 1:46485/149‑1 (MQ=255) cTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGtt < 5:303017/149‑1 (MQ=255) tGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTc > 1:149843/1‑149 (MQ=255) aGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTc < 4:209891/147‑1 (MQ=255) tgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAAc < 2:230268‑M2/105‑1 (MQ=255) a‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGtt > 4:45323/1‑134 (MQ=40) a‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGtt < 3:45323/134‑1 (MQ=40) cGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGc < 1:160159/149‑1 (MQ=255) ggCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGa < 4:294414/143‑1 (MQ=255) ggCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGa > 3:294414/1‑143 (MQ=255) cAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGa > 2:102033/1‑149 (MQ=255) aaCCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGacac > 8:139922/1‑149 (MQ=255) tcatcaCCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGAc < 2:149843/149‑1 (MQ=255) ggCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACCCTGGACAAGACCCCGCTcc > 4:52886/1‑148 (MQ=255) gCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGAccc > 3:269284/1‑142 (MQ=255) gCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGAccc < 4:269284/142‑1 (MQ=255) cAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGaa > 3:194340/1‑118 (MQ=255) cAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGaa < 4:194340/118‑1 (MQ=255) aaCGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTgg > 3:275516/1‑107 (MQ=255) aaCGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTgg < 4:275516/107‑1 (MQ=255) ccGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGCCCCCGGTCAGCACCGCCGTg < 7:139922/149‑1 (MQ=255) tGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTCACCGACGAAc > 8:109178/1‑149 (MQ=255) cTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAAc < 3:277320/147‑1 (MQ=255) aCCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAACCAgg > 8:168427/1‑149 (MQ=255) ccGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCACA‑TCGCTCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGTTCAGCACCGCCGTGa < 7:205721/135‑1 (MQ=255) ccGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGCAACTGGACAAGACCCCGGTCAGCACCGCCGTGa > 8:205721/1‑135 (MQ=255) cGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCa > 4:6147/1‑125 (MQ=255) cGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCa < 3:6147/125‑1 (MQ=255) gTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAACCAgg > 2:116023/1‑146 (MQ=255) gTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAACCAgg < 1:116023/146‑1 (MQ=255) | AAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGA‑CGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAA‑TCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGACGAACCAGG > NC_002947/216906‑217194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |