Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,693,686 C→G 7.7% P52R (CCT→CGT) ‡ PP_1489 → CheW domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,693,6860CG 7.7% 241.4 / 7.7 77P52R (CCT→CGT) ‡PP_1489CheW domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (32/38);  new base G (3/3);  total (36/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01

TTGCAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTGGCCT  >  NC_002947/1693541‑1693833
                                                                                                                                                  |                                                                                                                                                   
ttGCAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAcctgc                                                                                                                                                  >  1:286807/1‑149 (MQ=255)
  gCAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAcctgcct                                                                                                                                                >  1:238041/1‑149 (MQ=255)
   cAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAcctgcctg                                                                                                                                               <  2:238041/149‑1 (MQ=255)
   cAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAcctgcctg                                                                                                                                               <  7:299676/149‑1 (MQ=255)
    aaCTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAcctgcctg                                                                                                                                               <  2:119573/148‑1 (MQ=255)
    aaCTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTgg                                                                                                                                              >  1:185367/1‑149 (MQ=255)
    aaCTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTgg                                                                                                                                              >  1:36272/1‑149 (MQ=255)
    aaCTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTgg                                                                                                                                              >  1:41029/1‑149 (MQ=255)
     aCTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTTCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTggg                                                                                                                                             <  5:80911/149‑1 (MQ=255)
       tGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTc                                                                                                                                           >  8:194142/1‑149 (MQ=255)
         cgcACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCAGGTGCCTgggcgat                                                                                                                                         <  6:146792/149‑5 (MQ=255)
           cACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCACCCAGGCAGGTGCCTgggcgatcg                                                                                                                                       <  6:30271/149‑7 (MQ=255)
             ccGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCggg                                                                                                                                      >  4:203558/1‑148 (MQ=255)
              cGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCa                                                                                                                                    <  8:74395/149‑1 (MQ=255)
                   gggCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCACTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATtct                                                                                                                                <  5:119982/148‑1 (MQ=255)
                          gAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATc                                                                                                                        >  8:256234/1‑149 (MQ=255)
                           aaCACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCg                                                                                                                       <  4:116770/149‑1 (MQ=255)
                           aaCACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCg                                                                                                                       >  6:187746/1‑149 (MQ=255)
                              acCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTgg                                                                                                                    <  2:36272/149‑1 (MQ=255)
                              acCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTgg                                                                                                                    <  2:41029/149‑1 (MQ=255)
                                         gTTGTACCTGTAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTc                                                                                                         >  7:132678/1‑149 (MQ=255)
                                         gTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTc                                                                                                         >  1:31601/1‑149 (MQ=255)
                                             tACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCTCCCATCGTGGCCAGCTGGTTCCgg                                                                                                      <  5:322810/148‑1 (MQ=255)
                                             tACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCgg                                                                                                      <  6:33443/148‑1 (MQ=255)
                                               ccTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCa                                                                                                   <  2:147718/149‑1 (MQ=255)
                                                cTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCAt                                                                                                  <  1:12535/149‑1 (MQ=255)
                                                  gCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTGCTTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATc                                                                                                 >  1:90659/1‑149 (MQ=255)
                                                   cAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATc                                                                                                 <  3:203558/147‑1 (MQ=255)
                                                         cGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTg                                                                                          <  6:274573/148‑1 (MQ=255)
                                                          gCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTgcc                                                                                        >  5:284074/1‑149 (MQ=255)
                                                            aTCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTgccgc                                                                                      >  2:99161/1‑149 (MQ=255)
                                                               agagCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCtt                                                                                   <  7:194142/149‑1 (MQ=255)
                                                                gagCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTg                                                                                  <  5:187746/149‑1 (MQ=255)
                                                                 agCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGa                                                                                 <  2:31601/149‑1 (MQ=255)
                                                                      aGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCttt                                                                            <  3:147801/149‑1 (MQ=255)
                                                                      aGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCGGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCttt                                                                            <  6:184468/149‑1 (MQ=255)
                                                                           tttGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TCGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCttt                                                                            >  4:47393/1‑144 (MQ=255)
                                                                           tttGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TCGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCttt                                                                            <  3:47393/144‑1 (MQ=255)
                                                                             tGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGc                                                                     >  3:6807/1‑149 (MQ=255)
                                                                                  tGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCa                                                                       <  6:130795/142‑1 (MQ=255)
                                                                                  tGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCa                                                                       >  5:130795/1‑142 (MQ=255)
                                                                                  tGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCcggcg                                                                >  3:150975/1‑149 (MQ=255)
                                                                                    aGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCcggcg                                                                <  2:185367/147‑1 (MQ=255)
                                                                                    aGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCcggcg                                                                <  4:150975/147‑1 (MQ=255)
                                                                                         gCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAAc                                                         >  8:232453/1‑149 (MQ=255)
                                                                                                  gATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTg                                                                           <  1:291316/122‑1 (MQ=255)
                                                                                                   aTCGAAGTG‑TTGCCGCGTCAGCCGCACAAGCCGATCGCCCAGGCACATACCTGGGTCGCGGGCATTCTCGACCATCGAGGCCAGCTGGTTCAGGACATCCACCTTGCCGCCTTGAGCTTTGGACAGACGGCGGTGCAACGCACCAGAAc                                               >  8:283885/1‑149 (MQ=255)
                                                                                                       aaGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCAccagg                                           >  4:211461/1‑146 (MQ=255)
                                                                                                       aaGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGc                                           <  7:256234/149‑1 (MQ=255)
                                                                                                        aGTG‑TAGCCGCGTCAGCCGCGCAAGCCGATCGCCCAGGCACCTGCCTGGGGCGCGGGCATTCTCGCCCATCGTGGCCAGCGGGTTCCGGGCCTCGACCGTGCCGCCTTGAGCTGTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGcc                                          <  3:47616/149‑1 (MQ=255)
                                                                                                          tg‑tTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTCGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctg                                        <  1:99161/149‑1 (MQ=255)
                                                                                                             ttGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGATGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggt                                      >  4:180784/1‑149 (MQ=255)
                                                                                                               gCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGATCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggtgc                                    >  7:55358/1‑149 (MQ=255)
                                                                                                                ccGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCcggcg                                                                >  7:64991/1‑120 (MQ=255)
                                                                                                                ccGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCcggcg                                                                <  8:64991/120‑1 (MQ=255)
                                                                                                                ccGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggtgc                                    <  6:284074/148‑1 (MQ=255)
                                                                                                                   cgTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCAGGcgggtgctggt                                <  3:211461/149‑1 (MQ=255)
                                                                                                                    gTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGCCCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggtgctggtg                               >  3:72912/1‑149 (MQ=255)
                                                                                                                     tCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATACTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCACCCGGCGGTGCAACGCACAAGCACCCGCctggtgctggtg                               >  6:109589/1‑148 (MQ=255)
                                                                                                                         ccGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTa                          >  2:114962/1‑149 (MQ=255)
                                                                                                                          ctgtCAAGCCGATCGGGCAGGCACCTGCCTGGGTCGCGGGCTTTCTCGCCCTTCGTGGCCAGCTGGTTCCGGTCATGGACCTTGCCGCCTTGAGGTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTAc                         <  5:150028/146‑1 (MQ=255)
                                                                                                                             tCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCa                                                   >  5:61673/1‑120 (MQ=255)
                                                                                                                             tCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCa                                                   <  6:61673/120‑1 (MQ=255)
                                                                                                                             tCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTAcc                        >  4:192874/1‑147 (MQ=255)
                                                                                                                               acgCCGATCGCCCAGGCACCTGCCTGGGGCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGa                      <  2:286807/145‑1 (MQ=255)
                                                                                                                               aaGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGGCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAgg                    >  1:258442/1‑149 (MQ=255)
                                                                                                                                   cGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGATCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAggcggc                <  8:55358/149‑1 (MQ=255)
                                                                                                                                    gATCGCCCAGGCACCTGCGTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggtgctggt                                >  4:210362/1‑132 (MQ=255)
                                                                                                                                    gATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCctggtgctggt                                <  3:210362/132‑1 (MQ=255)
                                                                                                                                    gATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGcc               >  6:144395/1‑149 (MQ=255)
                                                                                                                                    gATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCAATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGcc               >  8:93438/1‑149 (MQ=255)
                                                                                                                                    cgcgacccAGGCAGGTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCaa                                                          >  7:92056/6‑106 (MQ=255)
                                                                                                                                    cgcgacccAGGCAGGTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCaa                                                          <  8:92056/101‑1 (MQ=255)
                                                                                                                                      tCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGGCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTg             <  8:132678/149‑1 (MQ=255)
                                                                                                                                       gacccAGGCAGGTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGCCCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGc            >  7:262067/3‑149 (MQ=255)
                                                                                                                                         cccAGGCAGGTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAg          >  4:25086/1‑149 (MQ=255)
                                                                                                                                         cccAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCGGCAg          >  3:305775/1‑149 (MQ=255)
                                                                                                                                            aGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCtt       >  8:237106/1‑149 (MQ=255)
                                                                                                                                             ggCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTg      <  7:237106/149‑1 (MQ=255)
                                                                                                                                             ggCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTg      <  7:232453/149‑1 (MQ=255)
                                                                                                                                             ggCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTg      <  1:114962/149‑1 (MQ=255)
                                                                                                                                               cACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTGGc    <  2:90659/149‑1 (MQ=255)
                                                                                                                                                 cctgcctgGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTGGCCt  <  5:144395/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TTGCAACTGCGCACCGCTCGGGCGGCGAACACCGAGGGGGCGTTGTACCTGCAGTTTCGCATCAGAGCGCAGCGTTTTGCCCTGAGCGTGCACGAGGTGATCGAAGTG‑TTGCCGCGTCAGCCGCTCAAGCCGATCGCCCAGGCACCTGCCTGGGTCGCGGGCATTCTCGCCCATCGTGGCCAGCTGGTTCCGGTCATCGACCTTGCCGCCTTGAGCTTTGGCCAGCCGGCGGTGCAACGCACCAGCACCCGCCTGGTGCTGGTGCACTACCGAGGCGGCCTGCAGCTTGGCCT  >  NC_002947/1693541‑1693833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑