Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,898,650	G→A	6.6%	intergenic (+56/‑115)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,898,650	0	G	A	6.6%	175.0 / 2.7	60	intergenic (+56/‑115)	PP_t16/PP_t17	tRNA‑Asp/tRNA‑Val
Reads supporting (aligned to +/- strand):  ref base G (27/29);  new base A (2/2);  total (29/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.50e-01

CACTCGATGTATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGCC  >  NC_002947/1898503‑1898781                                                                                                                                                    |                                                                                                                                    cacTCGATGTATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTaga                                                                                                                                    <  4:160067/149‑1 (MQ=32)   cTCGATGTATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGt                                                                                                                                  >  5:322469/1‑149 (MQ=34)    tCGATGTATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTc                                                                                                                                 >  6:234896/1‑149 (MQ=34)                       tAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGAtt                                                                                                              >  2:129893/1‑149 (MQ=255)                             aGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGgt                                                                                                        <  4:235806/149‑1 (MQ=255)                             aGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCGTTTTTTTTGGCTGATTTTTGgt                                                                                                        >  2:167803/1‑149 (MQ=255)                                        aTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGaa                                                                                             <  8:46794/149‑1 (MQ=255)                                        aTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGaa                                                                                             <  2:271035/149‑1 (MQ=255)                                        aTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGa                                                                                              <  4:44211/148‑1 (MQ=255)                                        aTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCACACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGaa                                                                                             <  2:267147/149‑1 (MQ=255)                                         tACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTTGTGTTTGACCGAAg                                                                                            >  7:185006/1‑149 (MQ=255)                                                   tCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGttt                                                                                                    >  4:57223/1‑131 (MQ=255)                                                   tCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGttt                                                                                                    <  3:57223/131‑1 (MQ=255)                                                   tCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTTAACGAAGTGTGaaaaa                                                                                   >  3:78653/1‑148 (MQ=255)                                                      cGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACtt                                                                               <  6:322469/149‑1 (MQ=255)                                                      cGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACtt                                                                               <  7:170563/149‑1 (MQ=255)                                                         cGGGGGTCGCGGGTTCGAGTCCCGGCCTCAGCGCCATATTGCACTTCCATGGCCCACTGAACACCCGTAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCTAAGTGTGAAAAAACTTCGa                                                                            <  4:206118/149‑1 (MQ=21)                                                          gggggTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGAt                                                                           <  8:2709/149‑1 (MQ=255)                                                                          aGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAgc                                                           >  7:153717/1‑149 (MQ=255)                                                                              ccGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGAc                                                                                                 >  3:181250/1‑107 (MQ=255)                                                                              ccGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGAc                                                                                                 <  4:181250/107‑1 (MQ=255)                                                                              ccGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGcc                                                        >  1:250126/1‑148 (MQ=255)                                                                               cGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      <  8:185006/149‑1 (MQ=255)                                                                                   cGCTTCGACATATTCCACTTCCAGGGACCACTGAACACCCGTAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTc                                                   <  6:105911/148‑1 (MQ=255)                                                                                    gCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGc                                                 <  1:129893/149‑1 (MQ=255)                                                                                         gcCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTa                                            <  5:234896/149‑1 (MQ=255)                                                                                         gcCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTa                                            <  2:250126/149‑1 (MQ=255)                                                                                           cATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGAGCCTGATTTTTGGTGTTTGAACGAAGTGTGAAAAAACTTAGATAAGTGCTTGGCAGAGCGGCaa                                                      >  4:120481/1‑137 (MQ=25)                                                                                           cATATTCCACTTCCAGGGCACACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      <  3:120481/137‑1 (MQ=255)                                                                                            atatTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGaa                                         >  7:262061/1‑149 (MQ=255)                                                                                            atatTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGaa                                         >  7:204957/1‑149 (MQ=255)                                                                                              atTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      <  4:155687/134‑1 (MQ=255)                                                                                              atTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      >  3:155687/1‑134 (MQ=255)                                                                                                  ctcTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCTCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATgcgc                                    <  4:17249/146‑1 (MQ=255)                                                                                                  cACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATgcgcg                                   >  3:237183/1‑149 (MQ=255)                                                                                                   aCTTACAGGGCCCACAGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTGTTTGTGCCTGAGTTTTTGTGTTTGACCGGAGTGGGAAAAAACTGCGATAAGTGCTTGGACGAGCGCCAAGTCGCCCGTAGAATgcgcgc                                  >  4:126189/1‑149 (MQ=255)                                                                                                        cAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGAtt                                                                                                              <  2:272763/68‑1 (MQ=255)                                                                                                        cAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCacac                             >  5:163178/1‑149 (MQ=255)                                                                                                             cccACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGt                                                                       >  5:86028/1‑102 (MQ=255)                                                                                                             cccACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGt                                                                       <  6:86028/102‑1 (MQ=255)                                                                                                              ccACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      >  3:249180/1‑118 (MQ=255)                                                                                                              ccACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCaa                                                      <  4:249180/118‑1 (MQ=255)                                                                                                               cACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCgagaga                      >  2:21652/1‑149 (MQ=255)                                                                                                                    aaCACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATg                  <  1:21652/148‑1 (MQ=255)                                                                                                                     ggccctggAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATggg                <  8:79136/143‑1 (MQ=255)                                                                                                                      cacCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGt               <  8:204957/149‑1 (MQ=255)                                                                                                                       acCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTg              <  7:195079/149‑1 (MQ=255)                                                                                                                         ccGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGAt            >  7:60580/1‑149 (MQ=255)                                                                                                                            gAAGTAACAAAGAAAGCGACCTTAGAGTCGCGTTTTTTTTGGCGTATTTTTTGGGTTTTACCCAAGGGGGAAAAAAAAGCGAAAAATGGGTTCCCGAGGCCCCAGTCGCCCGGAGAAGGGCGGCCACACCCCCAGACAggggggtgttg         >  6:171145/1‑142 (MQ=255)                                                                                                                              aggcaCAAAAAAAGCGACTCTAAGGTCGCTTTCTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGAtt           <  8:168767/141‑1 (MQ=38)                                                                                                                              aggcaCAAAAAAAGCGACTCTAAGGTCGCTTTCTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGAtt           >  7:168767/5‑145 (MQ=38)                                                                                                                                 aaCAAATAAAGCGACCTTAGAGTCGATTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCa     <  5:171145/148‑1 (MQ=255)                                                                                                                                  aCAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGGGTGATTTTTTGTGTTTGTCCCAAGTGTGAAAAAACTTAGATAATTGCTTTCCAAAGCGCCAAGTAGCCCGGAGAATTCGCGCCACACCCACAGACATGGGTGATTATCTGAGc   >  2:129868/1‑149 (MQ=255)                                                                                                                                  aCAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGc   <  5:36796/149‑1 (MQ=255)                                                                                                                                  aCAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGc   >  8:10286/1‑149 (MQ=255)                                                                                                                                  aCAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTCTGAAAAAACTTCGATAAGTGATTGCCAGAGCGCCAAGTCGCCCGTAGAAAGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGc   >  7:81834/1‑149 (MQ=255)                                                                                                                                   cAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGcc  >  3:98385/1‑149 (MQ=255)                                                                                                                                      aaaaagCGACTCTAAGGTCGCTTTCTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTg              <  5:242816/132‑1 (MQ=39)                                                                                                                                      aaaaagCGACTCTAAGGTCGCTTTCTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTg              >  6:242816/3‑134 (MQ=39)                                                                                                                                          agCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAgc                                                           <  5:273371/85‑1 (MQ=255)                                                                                                                                          agCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAgc                                                           >  6:273371/1‑85 (MQ=255)                                                                                                                                                    |                                                                                                                                    CACTCGATGTATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTCCACTTCCAGGGCCCACTGAACACCCGGAAGTAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTGTGCCTGATTTTTGGTGTTTGACCGAAGTGTGAAAAAACTTCGATAAGTGCTTGCCAGAGCGCCAAGTCGCCCGTAGAATGCGCGCCACACCGAGAGACATGGGTGATTAGCTCAGCC  >  NC_002947/1898503‑1898781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑