Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,520,583	A→T	6.0%	K612* (AAG→TAG)	PP_2212 →	leucine‑rich repeat‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,520,583	0	A	T	6.0%	208.7 / 2.6	67	K612* (AAG→TAG)	PP_2212	leucine‑rich repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base A (32/31);  new base T (2/2);  total (34/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.78e-01

GCAGATAATGCGGGTGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACTGGCAGCAGA  >  NC_002947/2520435‑2520731                                                                                                                                                     |                                                                                                                                                     gCAGATAATGCGGGTGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGa                                                                                                                                                      <  1:79724/149‑1 (MQ=255)     aTAATGCGGGTGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAg                                                                                                                                                    <  6:112453/147‑1 (MQ=255)     aTAATGCGGGTGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAg                                                                                                                                                    >  5:112453/1‑147 (MQ=255)               tGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCa                                                                                                                                        >  4:66184/1‑149 (MQ=255)                   aGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCg                                                                                                                                     >  6:8296/1‑148 (MQ=255)                   aGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGACAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCg                                                                                                                                     >  5:266713/1‑148 (MQ=255)                          gATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAggg                                                                                                                              <  4:21437/148‑1 (MQ=255)                            tGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCTCCGGTGAGGCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTTTTCGGCTGAAGGCGTTGATGCCATCGGACAgg                                                                                                                               <  5:280901/145‑1 (MQ=255)                             gCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATg                                                                                                                                           <  7:38466/132‑1 (MQ=255)                             gCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATg                                                                                                                                           >  8:38466/1‑132 (MQ=255)                                 aCTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGctgctg                                                                                                                      <  5:246007/149‑1 (MQ=255)                                  cTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTgg                                                                                                                     >  7:203537/1‑149 (MQ=255)                                         cgcgGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGgtg                                                                                                              <  3:280478/149‑1 (MQ=255)                                          gcggcgTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGgtgt                                                                                                             <  8:203537/149‑1 (MQ=255)                                            ggcgTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGAt                                                                                                                                            <  2:128878/116‑1 (MQ=255)                                               gTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGTAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAg                                                                                                         >  2:281110/1‑148 (MQ=255)                                                     gTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGc                                                                                                   >  1:117494/1‑148 (MQ=255)                                                     gTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGc                                                                                                   <  3:154614/148‑1 (MQ=255)                                                       ggAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAg                                                                                                >  8:118632/1‑149 (MQ=255)                                                        gagaATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAg                                                                                                <  3:66184/148‑1 (MQ=255)                                                        gagaATCGCCCGGCGCCGGTGAGCCGTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGTAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAgg                                                                                               >  4:19465/1‑149 (MQ=255)                                                         agaATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGc                                                                                              <  5:8296/149‑1 (MQ=255)                                                           aaTCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGt                                                                                            >  2:74799/1‑149 (MQ=255)                                                             tCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGAt                                                                                                                                            <  7:137372/99‑1 (MQ=255)                                                             tCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGAt                                                                                                                                            >  8:137372/1‑99 (MQ=255)                                                               gCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTggg                                                                                         <  2:117494/148‑1 (MQ=255)                                                                cccGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGgcg                                                                                       >  8:153959/1‑149 (MQ=255)                                                                cccGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGgcg                                                                                       >  3:112505/1‑149 (MQ=255)                                                                   ggCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGTAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCg                                                                                    <  1:281110/149‑1 (MQ=255)                                                                         ggTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTgg                                                                              <  6:266713/149‑1 (MQ=255)                                                                                 ttGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATg                                                                      >  3:206076/1‑149 (MQ=255)                                                                                   ggCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATg                                                                      <  4:112505/147‑1 (MQ=255)                                                                                    gCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGctgctg                                                                                                                      >  6:243486/1‑98 (MQ=255)                                                                                    gCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGctgctg                                                                                                                      <  5:243486/98‑1 (MQ=255)                                                                                    gCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCa                                                                    <  4:206076/148‑1 (MQ=255)                                                                                    gCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAg                                                                   >  6:286881/1‑149 (MQ=255)                                                                                     ccAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGcc                                                                                     <  1:170994/130‑1 (MQ=255)                                                                                     ccAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGcc                                                                                     >  2:170994/1‑130 (MQ=255)                                                                                           cTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCAt                                                             >  4:225646/1‑148 (MQ=255)                                                                                            ttGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAg                                                                   >  2:16769/1‑141 (MQ=255)                                                                                            ttGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAg                                                                   <  1:16769/141‑1 (MQ=255)                                                                                            ttGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCAt                                                             >  5:236940/1‑147 (MQ=255)                                                                                             tGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAg                                                          >  2:292087/1‑149 (MQ=255)                                                                                                   ccTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATg                                                                                                                                           <  7:45969/62‑1 (MQ=255)                                                                                                   ccTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATg                                                                                                                                           >  8:45969/1‑62 (MQ=255)                                                                                                      tCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGa                                                                                  <  3:78820/116‑1 (MQ=255)                                                                                                      tCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGa                                                                                  >  4:78820/1‑116 (MQ=255)                                                                                                       ccAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGtt                                                  <  3:225646/147‑1 (MQ=255)                                                                                                         aGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCgg                                              >  4:106631/1‑149 (MQ=255)                                                                                                           gcgcATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGcc                                            >  2:18/1‑149 (MQ=255)                                                                                                             gcATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGc                                          <  7:118632/149‑1 (MQ=255)                                                                                                                  cACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGcc                                            <  7:76349/142‑1 (MQ=255)                                                                                                                  cACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGcc                                            >  8:76349/1‑142 (MQ=255)                                                                                                                  cACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAAtt                                      <  7:153959/148‑1 (MQ=255)                                                                                                                     gCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGttt                                  >  3:50005/1‑149 (MQ=255)                                                                                                                     gCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGttt                                  >  3:108534/1‑149 (MQ=255)                                                                                                                      cATTGAAAGGTTTTTCCAGCGTGTTCGGCTGTAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTg                                 <  3:19465/149‑1 (MQ=255)                                                                                                                           aaaGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTggg                                                    >  6:264740/1‑125 (MQ=255)                                                                                                                           aaaGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTggg                                                    <  5:264740/125‑1 (MQ=255)                                                                                                                                tttttCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGAc                       <  5:286881/149‑1 (MQ=255)                                                                                                                                      cAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACa                 <  1:119568/149‑1 (MQ=255)                                                                                                                                       aGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAg                >  4:30661/1‑149 (MQ=255)                                                                                                                                             ttCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACt           <  4:108534/148‑1 (MQ=255)                                                                                                                                                 gCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGtt                                                  >  7:131345/1‑105 (MQ=255)                                                                                                                                                 gCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGtt                                                  <  8:131345/105‑1 (MQ=255)                                                                                                                                                  cTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACTGgcagc     <  4:50005/149‑1 (MQ=255)                                                                                                                                                   tGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGCTGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGGCACTGgcag      >  8:288291/1‑147 (MQ=255)                                                                                                                                                    gAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACTGGcagcag   >  8:5063/1‑149 (MQ=255)                                                                                                                                                     aaGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACTGGCAGCAGa  >  3:279345/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCAGATAATGCGGGTGGCAGGTATCGATGCAGACTTGTTGCGCGGCGTTCTCGTGGAGAATCGCCCGGCGCCGGTGAGCCTTGGCCAAACCTTGCGCGCCTTCCAGGCGCATGCACGCATTGAAAGGTTTTTCCAGCGTGTTCGGCTGAAGGCGTTGATGCCATCGGACAGGGAGCTGCTGGCCTGGTGTGAAGCAAGGCCAGGCGTGGGCGCCGGACTGGAGCAGATGCAGGTGCATGAGGCTGGGTTGCGGCCGCAATTGTTTGCTCGCCTGACAGAACAGTCACTGGCAGCAGA  >  NC_002947/2520435‑2520731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑