| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,772,154 | A→T | 5.7% | intergenic (+73/‑234) | PP_3331 → / → PP_3332 | membrane protein/cytochrome c‑type protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,772,154 | 0 | A | T | 5.7% | 252.9 / 3.0 | 80 | intergenic (+73/‑234) | PP_3331/PP_3332 | membrane protein/cytochrome c‑type protein |
| Reads supporting (aligned to +/- strand): ref base A (35/40); new base T (2/3); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGGTGGTTTCACTCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCGGTAGATGAAGCCCT > NC_002947/3772006‑3772297 | ccTGGTGGTTTCACTCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTaa > 2:57041/1‑149 (MQ=255) cTGGTGGTTTCACTCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAAt > 2:35366/1‑149 (MQ=255) ggtTTCACTCAGCGGCGTCGTACTAGGCTGGCGAAGGATACGCAGAATTAAAGCTCGAGATCTCGGTTGAGCCTACATACGTGTTTAGCAGCGGCCTGAGCGAGTGCCGCTGATCAATGAA‑AAAACAAAAGCCGGGAAGGTAATGCGcc > 7:254476/1‑149 (MQ=255) aCTCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCt > 8:167412/1‑149 (MQ=255) tCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCttt > 7:68245/1‑149 (MQ=255) aGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCttt < 4:71347/147‑1 (MQ=255) aGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTtttg > 3:79206/1‑149 (MQ=255) aGCGGCGTCGGACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAATAAAACAAAAGCCGGGACGGTAATGCGCCCCGGCtttt < 1:57041/149‑1 (MQ=255) ggcgTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTtttgttt < 4:202192/149‑1 (MQ=255) gcgTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTtttgtttg < 8:68245/149‑1 (MQ=255) gtACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGcc < 5:108117/148‑1 (MQ=255) gtACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGcc > 5:243786/1‑148 (MQ=255) tACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGa < 3:75000/149‑1 (MQ=255) gCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGGCGCATTACCGTCCCGGCTtttgtt > 4:5668/1‑131 (MQ=37) gCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGGCGCATTACCGTCCCGGCTtttgtt < 3:5668/131‑1 (MQ=37) gCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCt < 2:316902/149‑1 (MQ=255) cGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTg < 7:104014/149‑1 (MQ=255) cGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTg > 6:283071/1‑149 (MQ=255) ggCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCaa < 6:120702/149‑1 (MQ=255) gCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGcc > 3:192343/1‑146 (MQ=255) gtACGCAGTATGTCCGCTCGTGTGCGCGGTTTCGCCTGATTTCGTGTTTCGCTGCGGCCTGAGCTAGTGCCGCTGATCATTGAA‑AACACAATCGCCGGGACGGTATTGCGCCCCGGCTTTTGTTTGAGCCTATGAAA‑ACCATTCCaa < 8:254476/146‑1 (MQ=255) cTACGCAGAATGTCCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAaga < 8:265023/149‑1 (MQ=255) tACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAagag > 6:75962/1‑149 (MQ=255) cGCAGAATGACCGCTGGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGt < 4:79206/148‑1 (MQ=255) cGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGt > 8:62911/1‑148 (MQ=255) aGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTaaaa < 6:243786/149‑1 (MQ=255) aTGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAacac < 8:81762/149‑1 (MQ=255) agCTCGAGTTCGCGGTGGAGCCTCCTTTCGTGTTTCTCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAATCAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGAt < 4:230666/148‑1 (MQ=255) gCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCga > 8:91408/1‑145 (MQ=255) gCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCga < 7:91408/146‑2 (MQ=255) gTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCAGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCtt > 2:133827/1‑148 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCa < 3:243993/146‑1 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCa > 6:8157/1‑146 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCa < 5:8157/146‑1 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCa > 4:243993/1‑146 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAAc < 5:283071/148‑1 (MQ=255) gcgGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACg > 2:94472/1‑149 (MQ=255) gAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTtttgtt > 4:298735/1‑93 (MQ=255) gAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTtttgtt < 3:298735/93‑1 (MQ=255) aGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACg > 3:205087/1‑149 (MQ=255) cctcctTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGc < 2:151478/149‑1 (MQ=255) ctcctTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCa > 2:281260/1‑149 (MQ=255) tcctTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGTATCAGCTTCAACGTAGCACGGCAc > 4:147941/1‑149 (MQ=255) ctTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCAc < 7:167412/147‑1 (MQ=255) tttCGTGTTTCGCAGCTGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTa < 5:48163/137‑1 (MQ=255) tttCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTg > 6:276420/1‑149 (MQ=255) tttCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACCGTAATGCGCCCCGGCTATTGTTTGAGCCGATGAAA‑ACCCTGCCAACAGAAAAACACCGGATAAGCTTCAACGTa > 6:48163/1‑137 (MQ=255) tCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGc < 1:35366/148‑1 (MQ=255) tgtTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCGGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCTGATCAGCTTCAACGTAGCACGGCACCTGCAAgc < 2:50246/149‑1 (MQ=255) tgtTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAgc < 4:192343/149‑1 (MQ=255) tttCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAAc > 8:184562/1‑127 (MQ=255) tttCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAAc < 7:184562/127‑1 (MQ=255) tttCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAgcc < 7:62911/148‑1 (MQ=255) gCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCa < 4:205087/148‑1 (MQ=255) cAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCAcc > 4:227517/1‑149 (MQ=255) gCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAACCCCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCAccc < 1:94472/149‑1 (MQ=255) tGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCa < 2:115384/125‑1 (MQ=255) tGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCa > 1:115384/1‑125 (MQ=255) gAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGc < 6:257212/84‑1 (MQ=255) gAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGc > 5:257212/1‑84 (MQ=255) aGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGt > 2:174639/1‑149 (MQ=255) ccGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCa < 1:133827/149‑1 (MQ=255) ccGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCa > 7:107068/1‑149 (MQ=255) cTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCAcc < 6:210228/128‑1 (MQ=255) cTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCAcc > 5:210228/1‑128 (MQ=255) cACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTgc > 6:299652/1‑147 (MQ=255) tGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCCACCGgccagcc > 6:197620/1‑149 (MQ=255) tGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTgccagc > 8:21445/1‑148 (MQ=255) aaCAAAAGCCGGGGCGCATTACCGTCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTg > 7:231558/1‑102 (MQ=25) aaCAAAAGCCGGGGCGCATTACCGTCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTg < 8:231558/102‑1 (MQ=25) aCAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCgg < 5:276420/149‑1 (MQ=255) aCAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCgg < 8:107068/149‑1 (MQ=255) aaGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGAc < 2:210019/142‑1 (MQ=255) aaGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGAc < 2:205466/142‑1 (MQ=255) aaGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGAc > 1:210019/1‑142 (MQ=255) aaGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGAc > 1:205466/1‑142 (MQ=255) aaGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCgg > 7:279193/1‑145 (MQ=255) aGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCGGTAGAt < 3:227417/149‑1 (MQ=255) cGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGTATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCGGTAGATGAAGCCCt < 3:147941/149‑1 (MQ=255) cGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCGGTAGATGAAGCCCt < 5:75962/149‑1 (MQ=255) ggTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGAACCTGCAAGCCGCCACCCTGCGACGGTTAGCCGCACCCTGCCAGCCAGACCGGTAGATGAAGCCCt > 5:279354/1‑148 (MQ=255) | CCTGGTGGTTTCACTCAGCGGCGTCGTACTAGGCTGGCGAAGGCTACGCAGAATGACCGCTCGAGTTCGCGGTTGAGCCTCCTTTCGTGTTTCGCAGCGGCCTGAGCGAGTGCCGCTGATCACTGAA‑AAAACAAAAGCCGGGACGGTAATGCGCCCCGGCTTTTGTTTGAGCCGATGAAA‑ACCCTGCCAAGAGTAAAACACCGGATCAGCTTCAACGTAGCACGGCACCTGCAAGCCGCCACCCTGCGACGGTTCGCCGCACCCTGCCAGCCAGACCGGTAGATGAAGCCCT > NC_002947/3772006‑3772297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |