| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,039,566 | T→C | 6.1% | D141D (GAT→GAC) | PP_3560 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,039,566 | 0 | T | C | 6.1% | 191.0 / 2.2 | 65 | D141D (GAT→GAC) | PP_3560 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (30/31); new base C (2/2); total (32/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.48e-01 | |||||||||||
CCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGC > NC_002947/4039422‑4039713 | ccTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAg < 6:100267/149‑1 (MQ=255) cTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGACGCAGc > 7:265161/1‑149 (MQ=255) gggCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGAt > 1:220193/1‑148 (MQ=255) gggCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATc < 6:217639/149‑1 (MQ=255) acacGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGaa < 2:105124/149‑1 (MQ=255) tGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTc < 2:220193/149‑1 (MQ=255) cTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTATACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCa < 3:257544/148‑1 (MQ=255) gcgcGGCGGTTGCCCAAGGCGCTGGAGTCGAGCAAGGCCCAGCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGccc < 8:212129/149‑1 (MQ=255) cgcgGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAAc > 8:61158/1‑138 (MQ=255) cgcgGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAAc < 7:61158/138‑1 (MQ=255) gcgTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTAcc > 8:127384/1‑149 (MQ=255) gTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACGACCGAACCGGTCCGCCCTTACCCg > 3:95060/1‑149 (MQ=255) cccAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGAAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGaa > 1:6150/1‑149 (MQ=255) aaGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCt > 3:193157/1‑149 (MQ=255) aGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTg < 4:193157/149‑1 (MQ=255) gcTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACt > 7:232960/1‑149 (MQ=255) tGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTc < 1:62739/149‑1 (MQ=255) tgtgGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTcaca > 3:201322/1‑149 (MQ=255) tgGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGAt > 3:230367/1‑93 (MQ=255) tgGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGAt < 4:230367/93‑1 (MQ=255) ggATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCg > 3:119086/1‑149 (MQ=255) cAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCt < 5:263731/132‑1 (MQ=255) cAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCt > 6:263731/1‑132 (MQ=255) aGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTc > 2:82441/1‑149 (MQ=255) aGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGACGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGAc < 7:12093/134‑1 (MQ=255) aGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGACGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGAc > 8:12093/1‑134 (MQ=255) gCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGa < 1:39498/149‑1 (MQ=255) tCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCGCCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGAcc < 5:142991/149‑1 (MQ=255) cACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCg > 2:308623/1‑149 (MQ=255) ccGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGttt > 8:260100/1‑149 (MQ=255) aGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTgg < 1:174363/149‑1 (MQ=255) acacATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCAGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTc > 4:117436/1‑118 (MQ=255) acacATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCAGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTc < 3:117436/118‑1 (MQ=255) ttctCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGGTAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCAtt < 5:180601/146‑1 (MQ=255) acaTCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGa > 4:249155/1‑133 (MQ=255) acaTCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGa < 3:249155/133‑1 (MQ=255) acaTCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCAtt > 4:183612/1‑149 (MQ=255) aTCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGc > 6:58607/1‑149 (MQ=255) aTCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGc > 8:180355/1‑149 (MQ=255) tCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGcc < 3:183612/149‑1 (MQ=255) cAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGcc < 8:232960/148‑1 (MQ=255) aGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAg > 5:37068/1‑149 (MQ=255) aGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTAGAGGACCGTTTCTGGGCCAtt > 6:180601/1‑144 (MQ=255) ccTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTTAGCTCGATGCAGCGATCACCACCGGACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAg > 1:98877/1‑149 (MQ=255) tCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGc < 7:89726/137‑1 (MQ=255) tCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGc > 8:89726/1‑137 (MQ=255) ggCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGc > 2:87900/1‑149 (MQ=255) gCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGcc > 5:133811/1‑149 (MQ=255) aTGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCgg < 2:6150/149‑1 (MQ=255) gTCGGCGCAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCACTTCGAGGACCTTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCggg > 4:53172/1‑148 (MQ=255) tCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaatggc < 8:20749/149‑7 (MQ=255) tCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGACGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaatggc < 8:265161/149‑7 (MQ=255) ggcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGtata < 7:127384/149‑1 (MQ=255) cTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGcc < 7:260100/149‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGa < 5:98244/96‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGa > 6:98244/1‑96 (MQ=255) cgcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAg > 4:213441/1‑149 (MQ=255) gcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGt > 4:39662/1‑149 (MQ=255) gcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGCCGGGTATAGCGTGCCGCAGTTGc < 1:87900/149‑1 (MQ=255) gcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTg > 1:293847/1‑149 (MQ=255) gAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccag > 6:317272/1‑149 (MQ=255) aaGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTGCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagc < 5:85397/149‑1 (MQ=255) aGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagcc < 6:134457/149‑1 (MQ=255) aGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTc < 1:308623/149‑1 (MQ=255) gATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 2:293847/147‑1 (MQ=255) aTGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgcgc < 4:201322/149‑1 (MQ=255) aTGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGCACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgcgc < 1:82441/149‑1 (MQ=255) | CCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGC > NC_002947/4039422‑4039713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |