Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,039,659 | T→A | 8.4% | P172P (CCT→CCA) ‡ | PP_3560 → | LysR family transcriptional regulator |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,039,659 | 0 | T | A | 8.4% | 183.1 / 5.8 | 66 | P172P (CCT→CCA) ‡ | PP_3560 | LysR family transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base T (28/30); new base A (2/3); total (31/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.85e-01 |
CCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGC > NC_002947/4039514‑4039803 | ccTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTTAGCTCGATGCAGCGATCACCACCGGACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAg > 1:98877/1‑149 (MQ=255) ggCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGc > 2:87900/1‑149 (MQ=255) gCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGcc > 5:133811/1‑149 (MQ=255) aTGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCgg < 2:6150/149‑1 (MQ=255) gTCGGCGCAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCACTTCGAGGACCTTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCggg > 4:53172/1‑148 (MQ=255) tCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaatggc < 8:20749/149‑7 (MQ=255) tCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGACGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaatggc < 8:265161/149‑7 (MQ=255) ggcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGtata < 7:127384/149‑1 (MQ=255) cTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGcc < 7:260100/149‑1 (MQ=255) cgcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAg > 4:213441/1‑149 (MQ=255) gcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGt > 4:39662/1‑149 (MQ=255) gcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGCCGGGTATAGCGTGCCGCAGTTGc < 1:87900/149‑1 (MQ=255) gcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTg > 1:293847/1‑149 (MQ=255) gAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccag > 6:317272/1‑149 (MQ=255) aaGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTGCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagc < 5:85397/149‑1 (MQ=255) aGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagcc < 6:134457/149‑1 (MQ=255) aGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTc < 1:308623/149‑1 (MQ=255) gATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 2:293847/147‑1 (MQ=255) aTGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgcgc < 4:201322/149‑1 (MQ=255) aTGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGCACCGTTTCTGGGCCATTGCCAGCCCCGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgcgc < 1:82441/149‑1 (MQ=255) accaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGc < 6:37068/148‑1 (MQ=255) ccaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt > 3:252180/1‑88 (MQ=255) ccaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt < 4:252180/88‑1 (MQ=255) ccaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGt > 5:172108/1‑149 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTg > 1:281522/1‑149 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCAAGCCATTCCTGCGCTTCGACAAGCGTg > 7:118792/1‑149 (MQ=255) ccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGcc < 3:39662/149‑1 (MQ=255) gAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTg < 6:172108/149‑1 (MQ=255) aaCCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTgg > 5:267990/1‑149 (MQ=255) cGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggcc > 6:191354/1‑149 (MQ=255) cGGGCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTGCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggcc < 4:95060/149‑1 (MQ=255) gTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccgg > 5:243291/1‑149 (MQ=255) aGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggcc < 8:41007/148‑1 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACAGCTGTTCGAGGACCGTTTATGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGAGCCTGCGccggccgg > 5:305650/1‑146 (MQ=255) aCCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGa < 6:133811/147‑1 (MQ=255) cccGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATc > 8:146807/1‑148 (MQ=255) cccGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATc < 2:281522/148‑1 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATc > 5:250584/1‑146 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAg < 7:146807/149‑1 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAg > 2:114665/1‑149 (MQ=255) gCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAg > 2:170282/1‑148 (MQ=255) cAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCa < 6:243291/149‑1 (MQ=255) cAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCa < 5:191354/149‑1 (MQ=255) aCCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCGATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGaa < 2:98877/149‑1 (MQ=255) ccTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAAc < 3:213441/149‑1 (MQ=255) cTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAAc > 6:151164/1‑148 (MQ=255) cTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAAc > 8:31365/1‑148 (MQ=255) cTGTTCGAGGACCGTTTCTGGGCCTTTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCAATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggt < 3:53172/149‑1 (MQ=255) cTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCt > 4:71750/1‑86 (MQ=255) cTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCt < 3:71750/86‑1 (MQ=255) gACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggt > 1:16718/1‑140 (MQ=255) gACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggt < 2:16718/140‑1 (MQ=255) gTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGaa < 1:114665/149‑1 (MQ=255) tttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAAc > 5:266777/1‑149 (MQ=255) ttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGaa < 6:250584/147‑1 (MQ=255) gggCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATg > 8:159297/1‑149 (MQ=255) ggCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATgg < 7:31365/149‑1 (MQ=255) ccATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGaa > 6:168174/1‑149 (MQ=255) aTTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACt < 8:118792/149‑1 (MQ=255) cggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAAc > 6:35522/3‑147 (MQ=255) cggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAAc < 5:35522/145‑1 (MQ=255) ggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGCCAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGGCGCCAGCAGGGGCAGGTGTGCGAACTGCTGGAACTgg > 7:240972/2‑149 (MQ=255) gCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTgg < 7:180355/148‑1 (MQ=255) ccAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGAc < 7:159297/149‑1 (MQ=255) cAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGa > 4:267068/1‑147 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGc > 3:20601/1‑147 (MQ=255) tGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGaa < 4:2164/136‑1 (MQ=255) tGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGaa > 3:2164/1‑136 (MQ=255) | CCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGC > NC_002947/4039514‑4039803 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |