| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 58,750 | T→A | 10.6% | intergenic (‑661/+27) | PP_5424 ← / ← PP_0050 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 58,750 | 0 | T | A | 10.6% | 172.2 / 10.9 | 66 | intergenic (‑661/+27) | PP_5424/PP_0050 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/26); new base A (5/2); total (38/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
AGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTGGCGCGCTTTCCA > NC_002947/58604‑58896 | aGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTGACGGGGTCTGGCCTATGACCTATTTTGTTAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCtgctgc > 1:163143/1‑149 (MQ=255)aGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCtgctgc < 2:13138/149‑1 (MQ=255) gTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGGCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCtgctgc < 3:224949/148‑1 (MQ=255) tAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCgg > 1:36553/1‑149 (MQ=255) aTTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCttt > 6:37216/1‑149 (MQ=255) aTTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACCGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGGCACTAAAAAGCCCGCAGAAGCGGGCttt > 3:2575/1‑149 (MQ=255) ttCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGGCACTAAAAAGCCCGCAGCAGCGGGCtttt < 4:2575/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 7:115627/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 5:156253/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 3:265657/148‑1 (MQ=255) cGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTg < 5:37216/149‑1 (MQ=255) cGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTg > 4:269724/1‑149 (MQ=255) ggCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGc < 8:21918/149‑1 (MQ=255) gCTTTTCTGTGAAAAGCACCCCTTCATTTCGACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGGTGCGGGCTTTTTAGTg > 1:28683/1‑148 (MQ=255) gCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGc > 8:224784/1‑148 (MQ=255) gCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGc < 7:224784/148‑1 (MQ=255) ttttCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTg > 1:13278/1‑149 (MQ=255) tgAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCaaa < 4:102084/146‑1 (MQ=255) gAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACaa > 2:93009/1‑148 (MQ=255) aaaGCACACCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCa < 8:117400/149‑1 (MQ=255) cccTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCg > 3:3611/1‑149 (MQ=255) cTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGt > 2:85577/1‑149 (MQ=255) c‑acaAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATg < 4:3611/148‑1 (MQ=255) acaAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCGTTTTAGTGCCTGCAAACAATCa > 8:271746/1‑131 (MQ=255) gAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGc < 6:177988/149‑1 (MQ=255) ttCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACGAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAAACAGTAGCCGGTGAGAATGTTCACGATCACACCGATgg > 1:229195/1‑148 (MQ=255) cAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCAAGATCACACCGCTGGCAATg > 6:124559/1‑149 (MQ=255) aaTTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATgg < 1:85577/149‑1 (MQ=255) aaTTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATg < 6:102047/148‑1 (MQ=255) aaTTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATg > 5:102047/1‑148 (MQ=255) ggggTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCAGCAGCGGGCTTTTTa < 1:254991/83‑1 (MQ=255) ggggTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCAGCAGCGGGCTTTTTa > 2:254991/1‑83 (MQ=255) gTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACa > 1:230420/1‑149 (MQ=255) cTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATa < 2:229195/149‑1 (MQ=255) cTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGc < 1:93009/149‑1 (MQ=255) cTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGc > 6:240716/1‑149 (MQ=255) tCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCa < 7:164396/148‑1 (MQ=255) aCCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAGAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATgg > 3:52139/1‑126 (MQ=255) aCCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAGAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATgg < 4:52139/126‑1 (MQ=255) aCCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCAtt > 6:287059/1‑148 (MQ=255) cTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTca > 6:167636/1‑148 (MQ=255) cTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTca > 2:285860/1‑148 (MQ=255) tATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTcaca > 6:225160/1‑149 (MQ=255) aTTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGc > 4:85082/1‑72 (MQ=255) aTTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGc < 3:85082/72‑1 (MQ=255) tgtgAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACa < 5:167636/148‑1 (MQ=255) tgtgAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACa < 2:163143/148‑1 (MQ=255) tgtgAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACa < 2:230420/148‑1 (MQ=255) gtgAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGc > 5:155281/1‑149 (MQ=255) tgAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGc > 5:2537/1‑148 (MQ=255) aCCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCAtt > 2:28763/1‑135 (MQ=255) aCCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCAtt < 1:28763/135‑1 (MQ=255) cTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTgg > 8:126543/1‑105 (MQ=255) cTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTgg < 7:126543/105‑1 (MQ=255) tAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGc > 1:125914/1‑142 (MQ=255) c‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACgatg < 6:2537/148‑1 (MQ=255) aaGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACgatgat > 7:159802/1‑149 (MQ=255) tgtAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCAc < 4:200820/148‑1 (MQ=255) tAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGa < 4:66645/148‑1 (MQ=255) gCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTcac < 7:53665/120‑1 (MQ=255) gCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTcac > 8:53665/1‑120 (MQ=255) gCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGgcg > 5:272840/1‑149 (MQ=255) tAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGt > 7:149130/1‑149 (MQ=255) tAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGACAACGATGATCACGAGGTGGCGATTACAGGt > 2:94279/1‑149 (MQ=255) tAAAAAGCCCGCAGCAGCGGGCTTTTTAGTGTCTGCAACCAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGt > 7:278269/1‑149 (MQ=255) aaaaGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTgg > 7:232503/1‑149 (MQ=255) aaaaGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATCTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTgg > 3:172002/1‑149 (MQ=255) aaaaGCCCGCAGCAGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTgg > 8:78432/1‑149 (MQ=255) aaGCCCGCAGCAGCGGGCTTTTTAGTGTCTGCAAACAATCAGTAGCAGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTGgcg > 7:35721/1‑149 (MQ=255) ctgctgCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTGGCGCGCTTTc < 8:159802/149‑1 (MQ=255) ctgcGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTGGCGCGCTTTCca < 1:285860/148‑1 (MQ=255) | AGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTC‑ACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTAC‑AAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAACAATCAGTAGCCGGTGAGAATGTTCACGATCACACCGCTGGCAATGGCCACCAGAACATAGTCGCCATTCACATACAGCCAACGATGATCACGAGGTGGCGCATACAGGTGGCGCGCTTTCCA > NC_002947/58604‑58896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |