Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 6,013,885 T→C intergenic (+90/+20) xpt → / ← PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,013,8850TC100.0% 96.1 / NA 29intergenic (+90/+20)xpt/PP_5266xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (18/11);  total (18/11)

AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCG  >  NC_002947/6013740‑6014020
                                                                                                                                                  |                                                                                                                                       
aaTCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCAAGCCCCCGCCCAAAGGTGGAGGAAAGGTCTCGCACCGGTTGGCGGAACGGTGGGAGCCG‑GCCTGCCCGc                                                                                                                                       >  7:249381/1‑148 (MQ=255)
                           aaGGTGGTGTGGTCAGCTTCATCCAATAAACGCGACACCTGCTTCGCGGGCACTCCCGCTCACACAGTTGAAGCACATGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCTTTCCCGCGAATGGACGCAACCCTTTTATCTGGtt                                                                                                            <  2:320059/148‑1 (MQ=255)
                                         aGCTTCATCTAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACCGGTCTCGAACGCTGTGCCGTACCTGTGGTAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGc                                                                                              <  2:202622/148‑1 (MQ=255)
                                              cATCCAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGACCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaa                                                                                           <  1:282725/147‑1 (MQ=38)
                                                   aaTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCCCAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCGGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCGTTTATCTGGTTGCCGCCCGCCCCGCcaacaacca                                                                                     >  8:349458/1‑145 (MQ=37)
                                                   aaTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaacaa                                                                                     <  7:349458/147‑1 (MQ=255)
                                                                          gggCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGaagcag                                                                                                                                <  8:94249/81‑5 (MQ=255)
                                                                          gggCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGaagcag                                                                                                                                >  7:94249/1‑77 (MQ=255)
                                                                          gggCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGc                                                            >  2:108964/1‑149 (MQ=255)
                                                                              aCGCCCGCTCCCACATGTGCAGCACAGGGCTCGAACGCGGTGCCGTACCTGGGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCGGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCt                                                        <  8:249381/149‑1 (MQ=39)
                                                                                 cccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCg                                                     >  6:283899/1‑149 (MQ=255)
                                                                                      tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCCACACCAGGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                >  3:41330/1‑149 (MQ=255)
                                                                                          acaGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                             >  1:223799/1‑148 (MQ=21)
                                                                                              gTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAgcg                                                                                  >  7:146635/1‑107 (MQ=255)
                                                                                              gTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAgcg                                                                                  <  8:146635/107‑1 (MQ=255)
                                                                                                 cagcaCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCAt                                     >  4:323003/1‑149 (MQ=255)
                                                                                                           ctagAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGTCCGCAACCCTTTTATATGGTTGCCGCAAGCCCAGCAAACAACAAGCGATGGTAAATTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                           >  5:88276/4‑149 (MQ=38)
                                                                                                            tcGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                          >  7:345648/1‑149 (MQ=255)
                                                                                                            tcGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCG‑CCCAGGTg                         >  8:205686/1‑149 (MQ=255)
                                                                                                              gAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                        >  7:195856/1‑149 (MQ=255)
                                                                                                              gAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                        >  4:47233/1‑149 (MQ=255)
                                                                                                                   cTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTc                   <  1:108964/149‑1 (MQ=255)
                                                                                                                      tgCCGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCAt                 <  8:195856/148‑1 (MQ=255)
                                                                                                                        ccGTACCTGTGGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcc              >  3:239663/1‑149 (MQ=255)
                                                                                                                               tgtgGGAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCgg       >  5:199205/1‑149 (MQ=255)
                                                                                                                                    gAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg  <  3:47233/149‑1 (MQ=255)
                                                                                                                                    gAGCGG‑GCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCACg  >  7:50292/1‑149 (MQ=255)
                                                                                                                                           gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg  >  7:115138/1‑143 (MQ=255)
                                                                                                                                           gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg  <  8:115138/143‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                       
AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGG‑GCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCG  >  NC_002947/6013740‑6014020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑