| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,586,030 | 2 bp→TC | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,586,030 | 0 | C | T | 100.0% | 77.1 / NA | 25 | intergenic (+113/+102) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/20); total (5/20) | |||||||||||
| * | NC_002947 | 4,586,031 | 0 | T | C | 100.0% | 80.9 / NA | 25 | intergenic (+114/+101) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/20); total (5/20) | |||||||||||
GCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAACCCGCTCCTACCAGGGA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCC > NC_002947/4585887‑4586105 || gccgAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑gg < 5:17135/149‑1 (MQ=255) ccgAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCCTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGC‑gg < 1:268020/149‑1 (MQ=255) ccAGGAGCCACCGGTGAAGGCTTAAGGGTCGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAAc < 5:323089/149‑1 (MQ=255) ccAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAAc < 7:224019/149‑1 (MQ=255) cAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAAcc < 7:79343/149‑1 (MQ=255) aGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAAccc > 8:21135/1‑149 (MQ=255) gCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTc < 7:5641/149‑1 (MQ=255) gCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGAGCCGGCCTCTTCGCGGGTAAACCCGCTc < 4:116086/149‑1 (MQ=255) cACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCt < 2:329942/149‑1 (MQ=255) aGGGTAGACCACGGCACCTGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGGTGAGGCTGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAAGCCGCTCCTACCAGGGACCGTGCCg < 7:66343/149‑1 (MQ=38) aGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGcc < 4:95189/148‑1 (MQ=39) ggTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGc > 3:355802/1‑149 (MQ=39) ccACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAACCCCGCTCCTACCAGGGACCGTGCCGGCCTTGaa < 5:350144/149‑1 (MQ=39) ggAACAGATGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGcccc < 8:160502/148‑1 (MQ=38) aaCATCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGaa < 1:279416/133‑1 (MQ=38) aaCAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGaa > 2:279416/1‑133 (MQ=38) aCAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTgg < 4:126068/149‑1 (MQ=39) cAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGt < 8:125211/149‑1 (MQ=39) gctgctACATTTAAATGTTGCTGATGTCCGGGTG‑CTTGGCAATGTGAATACACCATGCATTGATTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGt < 1:120494/149‑1 (MQ=19) gctCCATTGAAAGGTTGAGGATGACCGGGGG‑CTTGGCAAGGTGA‑‑AGATCATGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAcc < 7:325906/149‑1 (MQ=37) ctCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGa < 8:232608/114‑1 (MQ=37) ctCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGa > 7:232608/1‑114 (MQ=37) ctCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAccc < 7:21135/149‑1 (MQ=38) ttGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAc < 8:146687/142‑1 (MQ=38) ttGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTAc > 7:146687/1‑142 (MQ=38) || GCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTG‑CTTGGCAAGGTGA‑‑AGATCTTGCATTGATCGGGCCGGCCTCTCTGC‑GGTAAACCCGCTCCTACCAGGGA‑CGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCC > NC_002947/4585887‑4586105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |