| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,918,860 | Δ1 bp | 5.9% | coding (16/471 nt) | PP_5188 ← | AsnC/Lrp family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,918,860 | 0 | C | . | 5.9% | 221.7 / 6.0 | 68 | coding (16/471 nt) | PP_5188 | AsnC/Lrp family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (33/31); new base . (2/2); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCCACGAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGGAGACTAGTA > NC_002947/5918716‑5919002 | gCCCACGAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGc > 2:61905/1‑149 (MQ=255) ccACGAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTc > 8:67414/1‑149 (MQ=255) cACGAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCg > 8:300508/1‑149 (MQ=255) gAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCtg > 1:250719/1‑149 (MQ=255) ccccTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCCCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCatta < 1:61905/149‑1 (MQ=255) cccTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCattat < 2:250719/149‑1 (MQ=255) ccTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCattatt > 4:230193/1‑149 (MQ=255) ctctTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCattatt > 5:63450/1‑148 (MQ=255) ttccttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATtatttatt > 5:233484/1‑149 (MQ=255) ttccttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATtatttatt > 7:17897/1‑149 (MQ=255) cttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATtctc < 4:87413/149‑1 (MQ=255) cttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATtctc > 4:245121/1‑149 (MQ=255) ttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGTGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATtctc > 7:23293/1‑148 (MQ=255) ttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTcc < 8:98246/123‑1 (MQ=255) ttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTcc > 7:98246/1‑123 (MQ=255) ttcAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATtctc > 8:74338/1‑148 (MQ=255) aaGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCcaca > 1:273716/1‑149 (MQ=255) cTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCata > 3:135159/1‑149 (MQ=255) tGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCatat > 1:82753/1‑149 (MQ=255) aaTGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATAttt > 3:298693/1‑149 (MQ=255) aaTGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATAtt < 4:21850/148‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCtt < 7:67414/149‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCtt < 7:74338/149‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCt < 6:78842/148‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCt < 6:161588/148‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCt < 6:233484/148‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCt < 8:17897/148‑1 (MQ=255) cgccgcCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGAAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCt < 7:300508/148‑1 (MQ=255) cgccgcCAGCACGGCGAGTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCtt < 3:226139/149‑1 (MQ=255) ccgccAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGa < 4:298693/149‑1 (MQ=255) cGGCGATTGCGACAGCCCGACGCGCTCTGTGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATaaaaaaa < 8:23293/149‑1 (MQ=255) cGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATaaaaaaa < 3:245121/149‑1 (MQ=255) gCGATTGCGACAGGCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAAtt < 5:10800/149‑1 (MQ=255) cGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTc < 2:273716/149‑1 (MQ=255) ttGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCTAACTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGc > 1:85005/1‑149 (MQ=255) cAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGa < 2:82753/149‑1 (MQ=255) cccGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGGCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCg < 6:63450/149‑1 (MQ=255) gACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGaaa > 7:39712/1‑149 (MQ=255) gcTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCAcc < 3:230193/149‑1 (MQ=255) ctctGCGATCTGTGCACTGGACAGCGAAGCGTACT‑CCTGCACCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCAccc < 5:277206/149‑1 (MQ=255) tctGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACAGTCGTAGGCGTCCAGCTCGCTGTGCAttattta < 8:16922/92‑1 (MQ=255) cGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCaa < 2:85005/146‑1 (MQ=255) tgCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATa < 8:72474/144‑1 (MQ=255) tgCACTGGACAGCGAAGCGTACT‑CCTGCAGCATCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCTCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAATAATTCGCCAAGTGAGCGAAATCACCCAATCATa < 1:204893/144‑1 (MQ=255) aGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGa > 4:13122/1‑119 (MQ=255) aGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGa < 3:13122/119‑1 (MQ=255) t‑cctGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGc > 4:219698/1‑148 (MQ=255) t‑cctGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGT‑CAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCaa > 3:257544/1‑149 (MQ=255) t‑cctGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGT‑CAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCaa > 3:253370/1‑149 (MQ=255) cctGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGc > 4:274195/1‑147 (MQ=255) tGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAg > 2:157297/1‑148 (MQ=255) gcagcaGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGaa > 4:121843/1‑149 (MQ=255) gcagcTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGt > 6:80344/1‑139 (MQ=255) gcagcTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGt < 5:80344/139‑1 (MQ=255) gcagcTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAAtt > 7:255958/1‑148 (MQ=255) cGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGc > 5:55258/1‑128 (MQ=255) cGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGc < 6:55258/128‑1 (MQ=255) gAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCt > 1:132144/1‑148 (MQ=255) cGACGGTCGTAGGCGT‑CAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCg < 4:257544/148‑1 (MQ=255) cGACGGTCGTAGGCGT‑CAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCg < 4:253370/148‑1 (MQ=255) gACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCg > 6:106684/1‑148 (MQ=255) gACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCg > 8:35685/1‑148 (MQ=255) gACGATCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCg > 6:311524/1‑148 (MQ=255) cGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTtct < 2:297359/134‑1 (MQ=255) cGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTtct > 1:297359/1‑134 (MQ=255) tCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGGAGAc > 2:130678/1‑148 (MQ=255) tAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGGAGACTAg > 8:180387/1‑148 (MQ=255) ggCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGGAGACTAGTa < 8:255958/148‑1 (MQ=255) gCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGga < 1:312256/139‑1 (MQ=255) gCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGga > 2:312256/1‑139 (MQ=255) | GCCCACGAATCACCCCCTCTTCCTTCAAGCGCTGAATGCGCCGCCAGCACGGCGATTGCGACAGCCCGACGCGCTCTGCGATCTGTGCACTGGACAGCGAAGCGTCCT‑CCTGCAGCAGCTCGAGGATGCGACGGTCGTAGGCGTCCAGCTCGCTGTGCATTATTTATTCTCCACACCATATTTTCTTGAATAAAAAAATTCGCCAAGTGAGCGAAATCACCCAATCATAGCGAAAAAATACCGCCAGCAACGTGCAAGAATTTCTCCCTCATTTGCGGAGACTAGTA > NC_002947/5918716‑5919002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |