| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 554,861 | Δ1 bp | 5.6% | coding (75/414 nt) | rplP → | 50S ribosomal protein L16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 554,861 | 0 | C | . | 5.6% | 233.4 / 6.3 | 71 | coding (75/414 nt) | rplP | 50S ribosomal protein L16 |
| Reads supporting (aligned to +/- strand): ref base C (33/34); new base . (2/2); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
TGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGCCGATCT > NC_002947/554714‑555009 | tggtCGCCAAGAAGAACTGAAACCACAAGCATCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGc > 1:196052/1‑148 (MQ=255)tggtCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCTCTGCGCGGTAGc > 2:186412/1‑148 (MQ=255) gtCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCaaa < 8:184880/149‑1 (MQ=255) ccAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGt > 1:307179/1‑147 (MQ=255) aagaaCTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTc > 2:156617/1‑149 (MQ=255) gAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAAt > 1:36706/1‑149 (MQ=255) gAAACCACAAGCACCAGCGCCTCGTAAAAAAGCAGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGACAGCTTCGGCGaa > 3:51326/1‑148 (MQ=255) aaaCCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGaa < 5:102291/147‑1 (MQ=255) aaaCCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAAt < 2:196052/148‑1 (MQ=255) ccACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCTCTGCGTGGTAGCAAAGTCAGCTTCGGCGAATTCGc < 1:186412/149‑1 (MQ=255) aaGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCt > 7:65046/1‑148 (MQ=255) gCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGc > 4:274402/1‑120 (MQ=255) gCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGc < 3:274402/120‑1 (MQ=255) cgcCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGtt < 6:230917/149‑1 (MQ=255) tCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTAGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTc > 3:78733/1‑149 (MQ=255) tAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTcgcg < 1:156617/149‑1 (MQ=255) aaaaaaGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCAGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCgg > 7:134286/1‑149 (MQ=255) aaaaGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTc > 3:208607/1‑149 (MQ=255) aaaaGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTc < 6:251039/149‑1 (MQ=255) aaGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGc < 8:19830/149‑1 (MQ=255) aaGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCCGAAAGCTGTTGCTCGCGGTCGc > 4:42318/1‑149 (MQ=255) aaGCTGCTAAGTAAGGGGTACGCCAAATGTCGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGc < 4:78733/149‑1 (MQ=255) gctgctAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCt < 6:156716/149‑1 (MQ=255) ctAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCAcc > 4:3462/1‑149 (MQ=255) aagtaagGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGc > 5:10825/1‑149 (MQ=255) aagtaagGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGc > 7:250556/1‑149 (MQ=255) agGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGcc < 4:208607/149‑1 (MQ=255) agGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGc > 7:107490/1‑148 (MQ=255) agGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGc < 2:36706/148‑1 (MQ=255) gTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGAt < 3:53181/149‑1 (MQ=255) gTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGAt < 6:10825/149‑1 (MQ=255) tACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATc < 2:307179/149‑1 (MQ=255) cGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGa < 3:3462/149‑1 (MQ=255) cGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGa < 6:309723/149‑1 (MQ=255) gCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTcg > 2:73601/1‑121 (MQ=255) gCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTcg < 1:73601/121‑1 (MQ=255) cAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTGGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTc > 4:245524/1‑149 (MQ=255) aaCCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGa < 1:109871/136‑1 (MQ=255) aaCCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGa > 2:109871/1‑136 (MQ=255) ccAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgc > 5:310512/1‑149 (MQ=255) ccAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgc > 5:221022/1‑149 (MQ=255) ccAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAG‑AAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgcg > 3:131107/1‑149 (MQ=255) ccAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAG‑AAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgcg > 3:126410/1‑149 (MQ=255) aaaGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgcgc > 5:82927/1‑149 (MQ=255) tACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGAccc > 2:203473/1‑149 (MQ=255) tACAAAATTCCGCAAGCAGATGACTGGCCACAACAGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCTGCGAATTCGCCCTGAAAGCTGTTGCTCGAGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGAc > 6:118186/1‑147 (MQ=255) aCAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGt > 6:84686/1‑92 (MQ=255) aCAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGt < 5:84686/92‑1 (MQ=255) aaaaTTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGt > 2:136098/1‑148 (MQ=255) aaTTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCAc > 1:302819/1‑149 (MQ=255) ccGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAG‑AAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTa < 4:131107/148‑1 (MQ=255) ccGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAG‑AAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTa < 4:126410/148‑1 (MQ=255) gATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGc > 7:96524/1‑100 (MQ=255) gATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGc < 8:96524/100‑1 (MQ=255) gATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCg < 8:65046/149‑1 (MQ=255) gATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCg < 6:221022/149‑1 (MQ=255) tGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTTGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGt < 3:245524/149‑1 (MQ=255) ccACAACCGTTGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCt < 7:108172/149‑1 (MQ=255) ccACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCt < 2:281068/149‑1 (MQ=255) cacaACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGcc > 6:201928/1‑91 (MQ=255) cacaACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGcc < 5:201928/91‑1 (MQ=255) aaCCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGAt > 2:309673/1‑149 (MQ=255) ccGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATcc < 4:51326/149‑1 (MQ=255) gTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCgt > 4:40074/1‑149 (MQ=255) cTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCgt > 8:68009/1‑144 (MQ=255) cTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCgt < 7:68009/144‑1 (MQ=255) cACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgcgc < 7:67620/99‑1 (MQ=255) cACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTgcgc > 8:67620/1‑99 (MQ=255) aCTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCgg > 7:58304/1‑149 (MQ=255) tGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTccc < 5:302264/145‑1 (MQ=255) tGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTccc > 6:302264/1‑145 (MQ=255) cgcgGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACaa < 6:310512/149‑1 (MQ=255) cgGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGc < 1:309673/149‑1 (MQ=255) cgGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGc < 5:118186/149‑1 (MQ=255) tAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGCCg > 8:249654/1‑148 (MQ=255) cAAAGTCAGCTTCGGCGAATTCGCCCCGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGCCGAtct < 3:42318/149‑1 (MQ=255) | TGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCAGATGACTGGCCACAACCGTGGTCTGGCACTGCGCGGTAGCAAAGTCAGCTTCGGCGAATTCGCCCTGAAAGCTGTTGCTCGCGGTCGCCTCACCGCTCGCCAGATCGAGTCCGCACGTCGTGCGCTGACCCGTCACGTTAAGCGTGGCGGTAAGATCTGGATCCGTGTGTTCCCGGACAAGCCGATCT > NC_002947/554714‑555009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |