| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,842,904:1 | +G | 11.8% | intergenic (+48/‑249) | ccoP‑II → / → PP_4259 | cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,842,904 | 1 | . | G | 11.8% | 225.3 / 29.2 | 68 | intergenic (+48/‑249) | ccoP‑II/PP_4259 | cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (27/33); new base G (4/4); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
CGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACTGCCA > NC_002947/4842759‑4843052 | cGGCCCAGGAACACCTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGCGCACCAGGCTGAGCCGGCCAAGGCGGAGTA‑CGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCtgtgt < 8:18913/149‑5 (MQ=38) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTa < 3:264251/149‑1 (MQ=255) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGT‑AACCCGCTCCTACA‑AGGATCCTGTGTAg < 4:182084/149‑1 (MQ=39) gCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCAACACCGGATCCg‑tgttg > 2:266843/1‑147 (MQ=255) gCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGCCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAg > 2:56038/1‑149 (MQ=37) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAgg < 6:34464/149‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAg < 8:228875/147‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAg > 7:228875/1‑147 (MQ=255) aGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑AGGATCCTGTGTAGGAGc < 2:155407/149‑1 (MQ=255) aGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCACCGTCACAGGATCCT‑TGTAGGAga > 4:68589/1‑148 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCg > 7:209017/1‑149 (MQ=255) acaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCt‑t > 3:263368/1‑137 (MQ=255) acaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCt‑t < 4:263368/137‑1 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGtt > 5:317040/1‑148 (MQ=255) aaCGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAAACCGCTCCGACACAGGATCCA‑TGTAGGGGCGGGGTTACCCGCGaa > 2:271928/1‑147 (MQ=39) gACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCGGCTACACAGGATCCT‑TGGAGGAGCGGGTTTACCCGCGCTGAGGc > 6:275298/1‑149 (MQ=39) aCAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 5:424/149‑1 (MQ=255) aacggTGCACTTGCTGGCGGCTTACGGCTACCGCCGGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTCGGAGGGGGTTTACCCGCGAAGAGGCCg < 6:76299/146‑1 (MQ=37) aaGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCAACAACACAGGATCCT‑TGTAGGAGAGGGTTTACCCGCGAAGAGGccc > 2:285047/1‑147 (MQ=255) gTGCAGTTGCTGGCGGCTTACGTCTCCTGCCTGCGGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑CGGCAGGCCTGGCCTCTTCGCGGGTAACCCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAc < 4:91363/149‑1 (MQ=37) gTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGaa < 7:234621/138‑1 (MQ=255) gTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGaa > 8:234621/1‑138 (MQ=255) gCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCCCGCCGTCACAGGATACT‑TGTTGGAGCGGGTTTAACCGCGCAGCGGCCGGTACTg > 7:116182/1‑149 (MQ=38) aCTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑CGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGTACTGGc < 8:1489/149‑1 (MQ=255) cTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGca < 6:262139/149‑1 (MQ=255) cTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTAAACAGGAAACT‑TGAACGAGCGGGTTTACCCGCGAAGAGCCCCGTACTgtc > 6:260941/1‑146 (MQ=37) cTTGCGGGCGGCTTACGTCTACAGCTTGTCGCACCTGGCTTAGGGGGCCATGGCTTATTA‑TGGCTGGCTTGGCCTATTGGCTGGTAAACCCGCTCATACACAGGATCTT‑TGTAGTAGGGGGTTTACCCGCGAAGAGGCCGGTACTGGca < 8:61884/149‑1 (MQ=21) tGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCa > 2:63910/1‑149 (MQ=255) gcggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTAcc < 2:296662/120‑1 (MQ=255) gcggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTAcc > 1:296662/1‑120 (MQ=255) cgtcTTACTTCTACAGCCTGTCGCACCAGGCTGAGCGGGCAATGTCTTAGTA‑TGGCAGGCCTGGCCTCTTCGCGGTTAAACCCTCTCCTAAACCGTATCTT‑TTTTGGAGCGGGTTTACCCGCGAAGAGGCCg < 4:103936/129‑1 (MQ=21) cggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATGCT‑TGTAGGAGCGGGTTTTCACGCGAAGAGGCCg > 3:103936/1‑132 (MQ=255) ggcTTACGTCTACCGCCTGTCGCACCCGGCTTAGCCGGCCACGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACTGCATCCT‑TGTCGGCGCGGGTTTACCCGCGAAGAGGCCGGTACTGGca < 2:241489/140‑1 (MQ=37) ggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAGAGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGCGGCCGGTACTGGca > 1:241489/1‑141 (MQ=255) aCGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg > 4:180204/1‑106 (MQ=255) aCGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 3:180204/106‑1 (MQ=255) aCGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCg < 1:63910/147‑1 (MQ=255) cGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCa < 8:209017/148‑1 (MQ=255) tCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAAACCCCTCCAACACAGGATACA‑TGTAGGAGCGGGTTTAACCCCGAAGAGGCCCGTACATGGACACCATTTATCGCacg > 6:181890/1‑146 (MQ=37) cAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑CGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTAACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGt < 1:266843/149‑1 (MQ=255) cAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTa > 6:126809/1‑92 (MQ=255) cAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTa < 5:126809/92‑1 (MQ=255) cAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCatacccca > 7:2628/1‑142 (MQ=255) cTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGac < 1:194627/149‑1 (MQ=255) aGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGacac < 2:263189/148‑1 (MQ=255) gCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCACGGAAGTGCCCTGGATCAATTGACACCCGCCATAacac > 4:195145/1‑149 (MQ=255) aGTA‑AGGCAGGCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGt < 6:103020/147‑1 (MQ=255) gTA‑ATGCAGGCCTTGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TTTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGttt < 7:69288/148‑1 (MQ=255) gTA‑AGGCAGGCCTGGCTTCTTGGCGGGTAAACCGGCTCCTACCCAGCATCCT‑TGTAGGTGGGGGTTTACCCGCTAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGttt < 1:285047/148‑1 (MQ=255) tggcgggcCGGGCATCTTCGCGGTTAAACCCGATCATACACCGCATCAT‑TGTCGCAGGGTTTTAACCCGCGAAGAGGCCTGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCAt < 3:68589/147‑1 (MQ=255) aggcaggcCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGaca > 1:78638/1‑128 (MQ=255) aggcaggcCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGaca < 2:78638/128‑1 (MQ=255) ctctTCGCGGTTAACCCCTTTCCTACACAGCATCCT‑TTTTGTAGGGGGTTTACCCTCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAAc < 7:270704/149‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAAcgcg > 5:135259/1‑149 (MQ=255) gcgGGTAAACCCGTTCCTACACAGGATCGT‑TGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACt < 5:260941/149‑1 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCg > 2:35763/1‑147 (MQ=255) cGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAgg < 6:111689/143‑1 (MQ=255) cGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAgg > 5:111689/1‑143 (MQ=255) gCTCCTACATCGTATCGT‑TGTAGTAGCGGTTTTACCCGCTAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGt < 5:181890/149‑1 (MQ=255) gCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGt < 3:118997/149‑1 (MQ=255) gCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGt > 3:80461/1‑149 (MQ=255) cTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTg > 8:261058/1‑149 (MQ=255) tACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGaa > 1:319251/1‑149 (MQ=255) acacAGGATCCT‑TGTAGGAGCGGGATTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAc > 1:178455/1‑149 (MQ=255) cacaGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAc < 7:85258/148‑1 (MQ=255) acaaGGATCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAc > 4:195229/4‑149 (MQ=255) caaGGATCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAcc < 7:261058/147‑1 (MQ=255) acaGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAcc > 3:287829/1‑148 (MQ=255) gATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATAcc < 7:147643/108‑1 (MQ=255) gATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATAcc > 8:147643/1‑108 (MQ=255) aTCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACt < 4:80461/149‑1 (MQ=255) tCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACTg < 3:195145/149‑1 (MQ=255) t‑tGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACTGCCa > 2:226074/1‑149 (MQ=255) t‑tGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCAGCCATAACACGTTTCATACCACGACCCCACCGCGACTAAAGGTCGCAGTGCGAACCCATACTGc > 3:201355/1‑147 (MQ=255) t‑tGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCCGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACTGCCa < 6:317040/149‑1 (MQ=255) | CGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTA‑AGGCAGGCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCATACTGCCA > NC_002947/4842759‑4843052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |