Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,417,332:1	+A	5.6%	coding (580/759 nt)	PP_1239 →	metallo‑beta‑lactamase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,417,332	1	.	A	5.6%	291.7 / 10.8	72	coding (580/759 nt)	PP_1239	metallo‑beta‑lactamase family protein
Reads supporting (aligned to +/- strand):  ref base . (33/35);  new base A (2/2);  total (35/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01

GCTGTTGCTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTCCAGGTGGCGAATCA  >  NC_002947/1417184‑1417477                                                                                                                                                      |                                                                                                                                                    gcTGTTGCTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGACTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTgcgc                                                                                                                                                      >  2:175504/1‑149 (MQ=255)        cTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCATGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTgg                                                                                                                                               <  2:989/148‑1 (MQ=255)        cTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTgg                                                                                                                                               <  2:309280/148‑1 (MQ=255)        cTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTgg                                                                                                                                               <  7:45293/148‑1 (MQ=255)         tGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTg                                                                                                                                             >  5:166402/1‑149 (MQ=255)           gAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCT‑GCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑Ac                                                                                                                                        >  3:131234/1‑149 (MQ=255)            agtgTTACCAGGGCCTGGATGCAGTGCTGATCGAGGCTAACCACTTTCGCGACGTGGTGGCACGTGGTCACTACCCGGCTTTTCTGAATCAGCGTGTGGGTGGCATGCAAGGTGATTTGAACATCCTCGAGGGTGCGC‑GCCTGGTT‑C‑Ac                                                                                                                                        <  4:118380/146‑1 (MQ=255)                 tACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGtt                                                                                                                                   >  8:35774/1‑149 (MQ=255)                  aCCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGtt                                                                                                                                   <  8:224592/148‑1 (MQ=255)                  aCCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTg                                                                                                                                  >  6:211042/1‑149 (MQ=255)                   ccAGGGCCTGGATGCACTGCTTATAGAGGCTAACCAATGTCGCGACCTGCTGGCACGTGGTCAGTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGtttg                                                                                                                                 <  8:291942/149‑3 (MQ=255)                   ccAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTgg                                                                                                                                 >  8:123326/1‑149 (MQ=255)                   ccAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCT‑GCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTgg                                                                                                                                 <  4:131234/148‑1 (MQ=255)                   ccAGGGCCTGGATGCACTGCTGATCGAGGCTAAACACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTgg                                                                                                                                 >  6:314770/1‑149 (MQ=255)                     aGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGc                                                                                                                               <  7:123326/149‑1 (MQ=255)                       ggCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTg                                                                                                                             >  2:37688/1‑149 (MQ=255)                        gCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTg                                                                                                                             >  8:96286/1‑148 (MQ=255)                                  aCTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGc                                                                                                                  <  3:20142/149‑1 (MQ=255)                                      ctgATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGTCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCaa                                                                                                                <  1:175504/147‑1 (MQ=255)                                      ctgATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAaca                                                                                                              >  4:248065/1‑149 (MQ=255)                                       tgATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGCCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAacac                                                                                                             >  4:102862/1‑149 (MQ=255)                                        gATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACAcc                                                                                                            >  7:229510/1‑149 (MQ=255)                                         aTCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCt                                                                                                           >  7:11838/1‑149 (MQ=255)                                                 tAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTgg                                                                                                   >  4:60016/1‑149 (MQ=255)                                                    ccACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGcc                                                                                                 >  4:190754/1‑148 (MQ=255)                                                       cTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGAAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTACTGTCGAGAAGTTGGGGTGGAAAAACCTCAAACACATGTTGCTGGccac                                                                                               >  1:107501/1‑147 (MQ=255)                                                        tGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCt                                                                                            >  7:43100/1‑149 (MQ=255)                                                            gcgACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTcag                                                                                         <  3:102862/148‑1 (MQ=255)                                                                ccTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCagcagc                                                                                     >  1:252524/1‑148 (MQ=255)                                                                    ctgGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAg                                                                                  <  5:314770/147‑1 (MQ=255)                                                                    ctgGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCCGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGaa                                                                                >  3:231236/1‑149 (MQ=255)                                                                      ggCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGaac                                                                               >  3:118384/1‑148 (MQ=255)                                                                            tGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGc                                                                        <  8:229510/149‑1 (MQ=255)                                                                            tGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCCGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGc                                                                        <  8:95441/149‑1 (MQ=255)                                                                              gTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGcc                                                                       <  5:41922/148‑1 (MQ=255)                                                                               tCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCca                                                                      >  8:168216/1‑148 (MQ=255)                                                                                     cccGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCt                                                                                                     <  5:1899/111‑1 (MQ=255)                                                                                     cccGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCt                                                                                                     >  6:1899/1‑111 (MQ=255)                                                                                     cccGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTgg                                                               <  3:190754/149‑1 (MQ=255)                                                                                      ccGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGATCAACCTGCCACACTTGGc                                                              >  2:221024/1‑149 (MQ=255)                                                                                        ggCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGccc                                                            <  5:211042/149‑1 (MQ=255)                                                                                               cTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCCGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGt                                                      <  4:231236/148‑1 (MQ=255)                                                                                                 gAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACACCCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCt                                                   >  1:215356/1‑149 (MQ=255)                                                                                                  aaGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCt                                                   <  3:282088/148‑1 (MQ=255)                                                                                                   agcagcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCttt                                                 <  2:252524/149‑1 (MQ=255)                                                                                                    gcagcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTg                                                >  4:312202/1‑149 (MQ=255)                                                                                                      agcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTc                                              <  8:11838/149‑1 (MQ=255)                                                                                                       gcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGc                                                                                                                  >  4:300794/1‑80 (MQ=255)                                                                                                       gcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGc                                                                                                                  <  3:300794/80‑1 (MQ=255)                                                                                                       gcGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCACGCCAGTGCTTTGTc                                              >  5:21073/1‑148 (MQ=255)                                                                                                         gggtgggtGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGac                                           <  6:166402/149‑1 (MQ=255)                                                                                                           gtgggtggCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAAcc                                                                           <  8:73368/115‑1 (MQ=255)                                                                                                           gtgggtggCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAAcc                                                                           >  7:73368/1‑115 (MQ=255)                                                                                                              ggtggCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCt                                                                                            >  4:5513/1‑95 (MQ=255)                                                                                                              ggtggCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCt                                                                                            <  3:5513/95‑1 (MQ=255)                                                                                                                tggCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACTCTTGGCCCGCCAGTGCTTTGTCGACACCCTCg                                    <  1:37688/149‑1 (MQ=255)                                                                                                                           ggCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCg                         >  1:157915/1‑149 (MQ=255)                                                                                                                             cATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGa                       <  3:312202/149‑1 (MQ=255)                                                                                                                              aTTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGAc                      <  4:118384/149‑1 (MQ=255)                                                                                                                               tttGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGgt                                 <  6:177755/137‑1 (MQ=255)                                                                                                                               tttGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACt                     <  7:168216/149‑1 (MQ=255)                                                                                                                               tttGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACt                     >  2:109080/1‑149 (MQ=255)                                                                                                                               tttGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCGTTGTCGACACCCTCGGgt                                 >  5:177755/1‑137 (MQ=255)                                                                                                                                    acaacCACCAGGCTGCGC‑GCCTTGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCTCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCt                 <  7:35774/148‑1 (MQ=255)                                                                                                                                      aacCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTcc               >  2:77639/1‑148 (MQ=255)                                                                                                                                       tgcaccaGGC‑GCGCAGCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGAcc                           <  3:245184/133‑1 (MQ=255)                                                                                                                                       tgcaccaGGC‑GCGCAGCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGAcc                           >  4:245184/3‑135 (MQ=255)                                                                                                                                       tgcaccaGGC‑GCGCAGCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCt                 >  7:268934/3‑145 (MQ=255)                                                                                                                                       tgcaccaGGC‑GCGCAGCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCt                 <  8:268934/143‑1 (MQ=255)                                                                                                                                        ccaccaGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGaacaa                                                                             <  3:25826/84‑1 (MQ=255)                                                                                                                                        ccaccaGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGaacaa                                                                             >  4:25826/1‑84 (MQ=255)                                                                                                                                           ccaGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTCCAGGTgg         <  3:60016/149‑1 (MQ=255)                                                                                                                                           ccaGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTCCAGGTgg         <  8:43100/149‑1 (MQ=255)                                                                                                                                                   cgc‑gcCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTCCAGGTGGCGAATCa  <  1:109080/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCTGTTGCTGGAGCGTTACCAGGGCCTGGATGCACTGCTGATCGAGGCTAACCACTGTCGCGACCTGCTGGCACGTGGTCACTACCCGGCTTTTCTGAAGCAGCGGGTGGGTGGCATGCAAGGGCATTTGAACAACCACCAGGCTGCGC‑GCCTGGTG‑C‑ACGAGTTGGGCTGGAACAACCTGCAACACCTGGTGCTGGCCCACCTCAGCAGCAAGAACAACCTGCCACACTTGGCCCGCCAGTGCTTTGTCGACACCCTCGGGTGTGACCCGGACTGGCTCCAGGTGGCGAATCA  >  NC_002947/1417184‑1417477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑