| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,460,539:1 | +A | 7.4% | coding (926/1167 nt) | algJ ← | alginate O‑acetylase AlgJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,460,539 | 1 | . | A | 7.4% | 262.1 / 15.1 | 68 | coding (926/1167 nt) | algJ | alginate O‑acetylase AlgJ |
| Reads supporting (aligned to +/- strand): ref base . (33/30); new base A (2/3); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.54e-01 | |||||||||||
GGTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGC > NC_002947/1460393‑1460680 | ggTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTgc‑gc < 4:234992/149‑1 (MQ=255) gTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTgc‑g > 6:275779/1‑147 (MQ=255) tCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAg > 3:296084/1‑149 (MQ=255) tCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAg < 5:275779/149‑1 (MQ=255) tttttCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAggc > 4:26130/1‑148 (MQ=255) cATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgc < 2:270915/148‑1 (MQ=255) gCAGATAACGTTCGGGTAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAGGCCCTGC‑GCAgc < 3:21635/149‑1 (MQ=255) gATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAGGCCCTGC‑GCAgcgac < 3:26130/149‑3 (MQ=255) aCGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCaa < 6:154624/149‑1 (MQ=255) cGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg < 2:257778/149‑1 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg > 7:193861/1‑148 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg > 4:94067/1‑148 (MQ=255) cGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGaa < 6:52167/148‑1 (MQ=255) cGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAg > 3:220116/1‑149 (MQ=255) ggggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAg < 4:296084/148‑1 (MQ=255) ggggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGt > 8:149077/1‑149 (MQ=255) cgccgcaccacaagTGGTGGTGTGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTg > 1:23069/6‑149 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCg > 2:266738/1‑149 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCg > 5:99660/1‑149 (MQ=255) caccacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTgg > 1:293036/1‑149 (MQ=255) cTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTg > 2:274177/1‑149 (MQ=255) gtggtgCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAg > 4:20418/1‑149 (MQ=255) gcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGt > 2:111915/1‑133 (MQ=255) gcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGt < 1:111915/133‑1 (MQ=255) gcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGt < 4:220116/149‑1 (MQ=255) cggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCTGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGt < 1:300572/148‑1 (MQ=255) ggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGc < 7:149077/149‑1 (MQ=255) gTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTa < 7:127253/149‑1 (MQ=255) ttCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTAc < 1:274177/149‑1 (MQ=255) ttCTTGAAGGCATCGCTTTGCAGGTACTTCAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCTTAGTTGGCTACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTAc < 3:186834/149‑1 (MQ=255) aaGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTg > 6:315447/1‑148 (MQ=255) aaGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGc < 1:266738/149‑1 (MQ=255) gCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAAc > 6:174977/1‑149 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg > 1:154082/1‑149 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCAGCTGCACCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg > 2:316501/1‑149 (MQ=255) cGCTTTGCAGGTACTTGAGCATGGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCGAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTg < 4:235332/141‑1 (MQ=255) cGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTg > 3:235332/1‑141 (MQ=255) cTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGAt > 7:37560/1‑149 (MQ=255) cAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCt < 8:37560/149‑1 (MQ=255) aGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCtt > 2:224154/1‑149 (MQ=255) aGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTAGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCATCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCtt > 8:234203/1‑149 (MQ=255) ttGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGc > 3:166021/1‑149 (MQ=255) ttGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGc < 2:154082/149‑1 (MQ=255) gAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGcc < 7:29307/78‑1 (MQ=255) gAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGcc > 8:29307/1‑78 (MQ=255) gAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCg > 4:265586/1‑148 (MQ=255) tCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGaacaac < 6:99660/149‑1 (MQ=255) cGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcg > 8:33929/1‑149 (MQ=255) ggCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcgc < 5:315447/149‑1 (MQ=255) ggCAGCAGCGGGCCATGGCCGTCTTCAGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcgc > 8:181504/1‑149 (MQ=255) cagcGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGc > 5:237744/1‑135 (MQ=255) cagcGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGc < 6:237744/135‑1 (MQ=255) gCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGt > 3:205027/1‑149 (MQ=255) ccATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTc > 7:197802/1‑149 (MQ=255) cATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCa > 2:157767/1‑149 (MQ=255) cGTCTTCTGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCg < 7:181504/149‑1 (MQ=255) cGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCg < 2:23069/149‑1 (MQ=255) cGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCg < 5:174977/149‑1 (MQ=255) cGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCg < 7:33929/149‑1 (MQ=255) gCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAc > 3:194528/1‑149 (MQ=255) gTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggc < 4:166021/148‑1 (MQ=255) ttGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccg < 1:157767/149‑1 (MQ=255) ggCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccgg < 1:224154/148‑1 (MQ=255) gCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggt > 7:19131/1‑149 (MQ=255) gCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggt < 3:20418/149‑1 (MQ=255) aCGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggtggt > 1:258550/1‑149 (MQ=255) gTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGc > 1:73506/1‑149 (MQ=255) gTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGc < 2:258550/149‑1 (MQ=255) cgcGCTGCAGCAGGCCCTGC‑GCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggtggt < 7:252829/145‑1 (MQ=255) cgcGCTGCAGCAGGCCCTGC‑GCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggtggt > 8:252829/3‑147 (MQ=255) | GGTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGC > NC_002947/1460393‑1460680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |