New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 63894	46 (0.910)	4 (0.080)	4/244	NT	7.4%	coding (822/888 nt)	PP_0055	transcriptional regulator
	?	NC_002947	= 63920	56 (1.180)					coding (796/888 nt)	PP_0055	transcriptional regulator

GGCAGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/63743‑63894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccgcCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAA  <  NC_002947/63920‑63780                                                                                                                                                                                                                                                                                                       GGCAGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCAC                                                                                                                                                   <  8:249507/148‑1  GCAGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCC                                                                                                                                                 >  3:21957/1‑149    AGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCG                                                                                                                                                >  3:129733/1‑148                         TCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCCGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCCGCGAGCTGCACAAGTCTGTG                                                                                                                          >  6:271350/1‑149                                    TGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGG                                                                                                                <  2:279140/148‑1                                         GCCGTGGCAGGTTGGGCCGCTGCCCCGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTG                                                                                                           <  5:271350/148‑1                                           CGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGG                                                                                                        <  5:72531/149‑1                                                                                                                                                  CACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAA  >  8:3655/1‑148                                                                                                                                                  CACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGC     <  6:165819/145‑1                                                                                                                                                  CACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGC                                                                    <  3:188303/82‑1                                                                                                                                                  CACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGC                                                                    >  4:188303/1‑82                                                                                                                                                   ACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGT                                                                >  3:287695/1‑85                                                                                                                                                   ACCCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGT                                                                <  4:287695/85‑1                                                                                                                                                     CCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAAC               >  5:6578/1‑132                                                                                                                                                     CCGCCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAAC               <  6:6578/132‑1                                                                                                                                                        CCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGC                                                                    <  8:112177/76‑1                                                                                                                                                                                                                                                                                                       GGCAGCCAGATTGGCCGGGCCGCGTCTGCAGCAGATGTTTGCCGTGGCAGGTTGGGCCGCTGCCCTGTTGTTGGCCGGCAAGGCTCTACTCGGCTAGCAACTCGCTTTGTTCGGCCGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/63743‑63894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccgcCGCGAGCTGCACAAGTCTGTGCGCCTGCGGGTGGTGTGGGACTACCTGCTGGCGTTGTGCGCGGCCGAACAAAGCGAGTTGCTAGCCGAGTAGAGCCTTGCCGGCCAACAACAGGGCAGCGGCCCAACCTGCCACGGCAAA  <  NC_002947/63920‑63780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.