| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 85515 = | 61 (1.210) | 3 (0.060) | 3/244 | NT | 5.0% | coding (1203/1566 nt) | PP_0075 | choline sulfate transporter |
| ? | NC_002947 | 85544 = | 56 (1.180) | coding (1174/1566 nt) | PP_0075 | choline sulfate transporter | |||||
CGCACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/85669‑85515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcagCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCA > NC_002947/85544‑85690 CGCACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAG < 8:172813/149‑1CGCACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGGGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAG < 5:86588/149‑1 GCACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGC < 8:793/149‑1 CACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCT < 2:205837/149‑1 CTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTG > 1:243019/1‑147 TCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTGCAGCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGGCCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCC > 3:204304/1‑149 GGCTGCAGCGACATTGCTGCTGGAGCTGCAGCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAG > 3:105579/1‑111 GGCTGCAGCGACATTGCTGCTGGAGCTGCAGCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAG < 4:105579/111‑1 CTGCAGCCGTCAGCGCCATCACCAGAACCTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCG < 4:105697/149‑1 CTGCAGCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCG > 6:109300/1‑149 AGCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCA < 7:172813/149‑1 CGCACCTGCCGATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/85669‑85515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcagCCGTCAGCGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCA > NC_002947/85544‑85690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |