| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 203404 = | 53 (1.050) | 6 (0.130) | 6/244 | NT | 12.9% | coding (8910/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 215337 = | 31 (0.650) | coding (20843/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/203555‑203404‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCG > NC_002947/215337‑215484 CGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGGTGGTTTCGCCAGCCTTGATGGTG > 4:128718/1‑146CGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTG < 3:128718/146‑1 GCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCT > 5:314643/1‑149 CCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGG < 5:139538/149‑1 CCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGG > 3:278761/1‑143 CCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGG < 4:278761/143‑1 ACCAGTGGCGTCCTCCGCCGAGTTGATGGCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCAGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCA < 8:113042/149‑1 CCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCGGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAG < 5:210136/149‑1 CAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCGGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGG < 6:199717/149‑1 GTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCAGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTC < 6:132155/149‑1 TGGCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCA > 6:327101/1‑149 GCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACC < 5:327101/149‑1 GACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGG < 5:283319/142‑1 GACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGG > 6:283319/1‑142 CCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACG > 7:246303/1‑149 CCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATC > 5:183286/1‑127 CCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATC < 6:183286/127‑1 GTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCG > 3:42243/1‑149 GTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTC < 8:246303/148‑1 CGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/203555‑203404‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCG > NC_002947/215337‑215484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |