New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 240111 = | 50 (0.990) | 4 (0.080) | 4/244 | NT | 8.0% | coding (406/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
? | NC_002947 | 240158 = | 45 (0.940) | coding (453/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
GCGGCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/240265‑240111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAA > NC_002947/240158‑240301 GCGGCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTT > 7:46692/1‑149 CGGCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTG < 7:245990/149‑1 TGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCG > 7:67340/1‑88 TGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCG < 8:67340/88‑1 CAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCTGGCTACCGTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAG < 2:286499/130‑1 CAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAG > 1:286499/1‑130 GCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTC > 5:284211/1‑149 CTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAG < 6:284211/148‑1 TGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCT > 6:257886/1‑148 CGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAA < 7:119129/149‑1 GCGGCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/240265‑240111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAA > NC_002947/240158‑240301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |