| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 299241 = | 64 (1.270) | 4 (0.080) | 4/248 | NT | 6.6% | coding (1885/2586 nt) | yhgF | transcriptional accessory protein |
| ? | NC_002947 | 299279 = | 52 (1.070) | coding (1847/2586 nt) | yhgF | transcriptional accessory protein | |||||
TGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCATCTCCGGCCTCAATGCCACCCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/299390‑299241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCACGCCCACGGCGTTCACACAGTCCTCGACTACCGCGTCCAG > NC_002947/299279‑299424 TGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCATCTCCGGCCTCAATGCCACCCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGT < 6:306289/149‑1TGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCATCTCCGGCCTCAATGCCACCCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGT < 7:269426/149‑1 GCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTC < 5:165194/115‑1 GCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTC > 6:165194/1‑115 CACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCAC > 3:114312/1‑145 CACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCAC < 4:114312/145‑1 GTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCACGCCCACGGCGTTCACACAGTCCTCGACTACCGCGTCCAG < 4:36349/149‑1 GTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCACGCCCACGGCGTTCACACAGTCCTCGACTACCGCGTCCAG < 5:224461/149‑1 GTGGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCACGCCCACGGCGTTCACACAGTCCTCGACTACCGCGTCCAG < 5:306289/149‑1 TGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCATCTCCGGCCTCAATGCCACCCTGGCACAGAACATCGTCGCCCACCGCGATGCCAATGGTCCGTTTGCCACCCGGGCAGCGTTGAAAAAGGTCAGCCGCCTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/299390‑299241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgGCAAACGGACCATTGGCATCGCGGTGGGCGACGATGTTCTGTGCCAGGGTGGCATTGAGGCCGGAGATGCGCGTCAGCAGCGCCACCGAAGCGGTGTTCACGTCCACGCCCACGGCGTTCACACAGTCCTCGACTACCGCGTCCAG > NC_002947/299279‑299424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |