| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 478639 = | 62 (1.230) | 3 (0.060) | 3/240 | NT | 5.2% | coding (830/1107 nt) | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| ? | NC_002947 | 478718 = | 52 (1.110) | coding (751/1107 nt) | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase | |||||
AACAACCGCTGAACGTGCGCTGGGCCTGCCTGTTGCGGGGGTTGCCACCGACATCGATCAAAGCCGTCAACCAGCGCCTGAAGGCACCGCGAGAGTGCCAGGAACTGGCCATGCTGACCGGGGAATGCCTGGCGCAGGGTAATCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/478789‑478639‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggcgctGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTTCAGCGGTTGTTCGTGCGCCGCCGCCTGCTCCAGCGCCGCCAATGTCCGGGAGCCGTCATCGAGCTCAGGCAGCAGCTCCTGCAG > NC_002947/478718‑478862 AACAACCGCTGAACGTGCGCTGGGCCTGCCTGTTGCGGGGTTTGCCACCGACATCGATCAAAGCCGTCAACCAGCGCCTGAAGGCACCGCGAGAGTGCCAGGAACTGGCCATGCTGACCGGTGAATGCCTGGCGCAGGGTAATCAGGCG > 6:245998/1‑149 CCAGCGCCTGAAGGCACCGCGAGAGTGCCAGGAACTGGCCATGCTGACCGGGGAATGCCTGGCGCAGGGTAATCAGGCGCTGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTTCAGCGGT > 8:61473/1‑149 GAAGGCACCGCGAGAGTGCCAGGAACTGGCCGTGCTGACCGGGGAATGCCTGGCGCAGGGTAATCAGGCGCTGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTT < 5:120509/133‑1 GAAGGCACCGCGAGAGTGCCAGGAACTGGCCGTGCTGACCGGGGAATGCCTGGCGCAGGGTAATCAGGCGCTGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTT > 6:120509/1‑133 GGCGCTGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTTCAGCGGTTGTTCGTGCGCCGCCGCCTGCTCCAGCGCCGCCAATGTCCGGGAGCCGTCATCGAGCTCAGGCAGCAGCTCCTGC < 2:165801/149‑1 CGCTGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTTCAGCGGTTGTTCGTGCGCCGCCGCCTGCTCCAGCGCCGCCAATGTCCGGGAGCCGTCATCGAGCTCAGGCAGCAGCTCCTGCAG < 3:10272/149‑1 AACAACCGCTGAACGTGCGCTGGGCCTGCCTGTTGCGGGGGTTGCCACCGACATCGATCAAAGCCGTCAACCAGCGCCTGAAGGCACCGCGAGAGTGCCAGGAACTGGCCATGCTGACCGGGGAATGCCTGGCGCAGGGTAATCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/478789‑478639‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggcgctGGTTGACGGCTTTGATCGATGTCGGTGGCAACCCCCGCAACAGGCAGGCCCAGCGCACGTTCAGCGGTTGTTCGTGCGCCGCCGCCTGCTCCAGCGCCGCCAATGTCCGGGAGCCGTCATCGAGCTCAGGCAGCAGCTCCTGCAG > NC_002947/478718‑478862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |