New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 505818 = | 66 (1.310) | 5 (0.100) | 4/246 | NT | 7.4% | coding (312/1482 nt) | trpE | anthranilate synthase component 1 |
? | NC_002947 | 505877 = | 62 (1.290) | coding (371/1482 nt) | trpE | anthranilate synthase component 1 |
GTCGGACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505971‑505818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTTG > NC_002947/505877‑506022 GTCGGACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAA > 6:323982/1‑149 GACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTT < 2:80871/149‑1 GCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTGGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATG > 8:124620/1‑147 GCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTAGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATG < 7:124620/147‑1 CCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTG > 3:213716/1‑149 CCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTAC > 7:37613/1‑129 CCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTAC < 8:37613/129‑1 ACTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTG > 6:78677/1‑149 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGTGGCCAGCCCCAACCCAGACCCGCTTGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTTGCGGGCAAGATGCACGCCATCGTG < 4:270434/148‑1 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGT < 1:140425/149‑1 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGT < 7:68781/147‑1 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGG < 1:282385/104‑1 CTTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGG > 2:282385/1‑104 TTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTT > 1:218704/1‑149 TTTGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTT > 3:299965/1‑149 TGGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTTG < 5:78677/148‑1 GTCGGACACCATCAGCAGGATATCCGGTACGCCCAGCGGGTCTGGGTTGGGGCTGGCCCCCAGGCGCTTTTCTACATAGCGCACGCAGTCGTAGCCAAAGTAGCCGACCAGGCCGCCATTGAAACGCGGCAGGCCTGGGATATCGGCAACTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/505971‑505818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actttgGCTACGACTGCGTGCGCTATGTAGAAAAGCGCCTGGGGGCCAGCCCCAACCCAGACCCGCTGGGCGTACCGGATATCCTGCTGATGGTGTCCGACGCGGTGGTGGTGTTCGACAACCTGGCGGGCAAGATGCACGCCATCGTGTTG > NC_002947/505877‑506022 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |