| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 516248 = | 54 (1.070) | 3 (0.060) | 3/244 | NT | 5.1% | coding (744/783 nt) | PP_0429 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 516323 = | 60 (1.260) | coding (669/783 nt) | PP_0429 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
CAAGCCGCGCTGCCTCAGCCCCGAGGAAGTGGCGCTGTACACCGTGCGGGCACTGGACAAGAACCGCGCACTGATCATGCCCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/516401‑516248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAGTACCGAGACCTTGATG > NC_002947/516323‑516470 CAAGCCGCGCTGCCTCAGCCCCGAGGAAGTGGCGCTGTACACCGTGCGGGCACTGGACAAGAACCGCGCACTGATCATGCCCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGG > 3:54398/1‑149 ACTGGACAAGAACCGCGCACTGATCATGCGCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGG < 2:78846/102‑1 ACTGGACAAGAACCGCGCACTGATCATGCACGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGG > 1:78846/1‑102 ATCATGCCCGGCCGGCGCAACCGCGGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGG > 1:146444/1‑148 ATGCCCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGC > 8:289306/1‑149 CCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGG > 3:130087/1‑149 GGCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAG > 5:122310/1‑139 GGCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAG < 6:122310/139‑1 GCCGGGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAGTACCGAGACCT < 7:35895/149‑1 GGCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAGTACCGAGACCTTGAT > 7:194033/1‑149 GCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAGTACCGAGACCTTGATG > 4:128021/1‑149 CAAGCCGCGCTGCCTCAGCCCCGAGGAAGTGGCGCTGTACACCGTGCGGGCACTGGACAAGAACCGCGCACTGATCATGCCCGGCCGGCGCAACCGCTGGCTGGCGTTCGCACCGCGGCTGCTGCCGCGCTGGCTGGTGCGCAAGCTGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/516401‑516248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggCATGATCAGTGCGCGGTTCTTGTCCAGTGCCCGCACGGTGTACAGCGCCACTTCCTCGGGGCTGAGGCAGCGCGGCTTGCCATCGAGCCGCGCAATGCGCCGGCGTGCGGAACGTACCGGGCCAGGGCACAGTACCGAGACCTTGATG > NC_002947/516323‑516470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |