| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 535620 | 56 (1.110) | 4 (0.080) | 3/242 | NT | 6.7% | coding (55/696 nt) | rplA | 50S ribosomal protein L1 |
| ? | NC_002947 | = 535662 | 59 (1.250) | coding (97/696 nt) | rplA | 50S ribosomal protein L1 | |||||
CTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/535523‑535620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggcaGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGC < NC_002947/535662‑535522 CTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTT < 3:91145/149‑1CTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTT < 4:54543/149‑1 TAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCG > 7:251826/1‑119 TAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCG < 8:251826/119‑1 AGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGC < 2:322126/149‑1 CTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/535523‑535620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggcaGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGC < NC_002947/535662‑535522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |