| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 572834 = | 58 (1.150) | 3 (0.060) | 3/244 | NT | 5.4% | coding (256/1425 nt) | PP_0486 | GntR family transcriptional regulator |
| ? | NC_002947 | 572884 = | 51 (1.070) | coding (206/1425 nt) | PP_0486 | GntR family transcriptional regulator | |||||
CTTGAACAGGACATCGAAAGTGGTCGGCTTGCAGAAGGCGATCGCTTACCCACGCTCAAGGACCTGGCCGAGGCGCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/572987‑572834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggccCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCTGTTCAAGGGCATCAGCGATCATCAGGTAAACCGGCTGTGTTTGATGGCTG > NC_002947/572884‑573030 CTTGAACAGGACATCGAAAGTGGTCGGCTTGCAGAAGGCGATCGCTTACCCACGCTCAAGGACCTGGCCGAGGCGCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGG > 2:96984/1‑148 GAACAGGACATCGAAAGTGGTCGGCTTGCAGAAGGCGATCGCTTACCCACGCTCAAGGACCTGGCCGAGGCGCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAG < 3:104152/148‑1 GCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTA > 7:101344/1‑76 GCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTA < 8:101344/76‑1 AGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAGGCCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCT > 6:90453/1‑149 GGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAGGCCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGC > 7:130914/1‑101 GGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAGGCCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGC < 8:130914/101‑1 CCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCTGTTCAAGGGCATCAGCGATCATCAGGTAAACCGGCTGTGTTTGATGGCTG > 1:306776/1‑149 CCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCTGTT > 3:61712/1‑102 CCCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCTGTT < 4:61712/102‑1 CTTGAACAGGACATCGAAAGTGGTCGGCTTGCAGAAGGCGATCGCTTACCCACGCTCAAGGACCTGGCCGAGGCGCTGAATGTAACCCCCGGCACGGTTGGCAGGGCCTACGACGAAGCAGCCAAGCGTGGTCTGGTGGCTGGCGAGGTAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/572987‑572834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggccCTGCCAACCGTGCCGGGGGTTACATTCAGCGCCTCGGCCAGGTCCTTGAGCGTGGGTAAGCGATCGCCTTCTGCAAGCCGACCACTTTCGATGTCCTGTTCAAGGGCATCAGCGATCATCAGGTAAACCGGCTGTGTTTGATGGCTG > NC_002947/572884‑573030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |