New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	597221 =	53 (1.050)	6 (0.120)	6/246	NT	11.2%	coding (225/582 nt)	PP_0508	hypothetical protein
	?	NC_002947	597257 =	45 (0.940)					coding (189/582 nt)	PP_0508	hypothetical protein

CATGACCACGCCCACGGCTCCCTCGGCGCCCACGAGCATGGCGTAGCCAAGCTCAACGCAGTACTCGATGGCAATACCCTGGAACTGGAGCTGGACAGCCCGGCAATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/597370‑597221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGGGCGTGGTCATGATCATGGTCATCGTGAGCATGGGCCACGGCCAG  >  NC_002947/597257‑597403                                                                                                                                                                                                                                                                                                           CATGACCACGCCCACGGCTCCCTCGGCGCCCACGAGCATGGCGTAGCCAAGCTCAACGCAGTACTCGATGGCAATACCCTGGAACTGGAGCTGGACAGCCCGGCAATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGA                                                                                                                                                      >  3:142486/1‑149                                                                                    ACTGGAGCTGGACAGCCCGGCAATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGA                                                                                                                                                      <  4:194370/66‑1                                                                                    ACTGGAGCTGGACAGCACGGCAATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGA                                                                                                                                                      >  3:194370/1‑66                                                                                                         AATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGG                                              <  1:34069/149‑1                                                                                                          ATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGG                                              >  2:34069/1‑148                                                                                                           TGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACAAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGG                                                       <  3:258744/138‑1                                                                                                           TGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACAAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGG                                                       >  4:258744/1‑138                                                                                                               CCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGGGCGTGG                                        >  5:198049/1‑149                                                                                                                    TCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGACCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGGGCGTGGTCAT                                    >  2:248987/1‑148                                                                                                                                                     ACCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGGGCGTGGTCATGATCATGGTCATCGTGAGCATGGGCCACGGCCAG  >  6:79632/1‑149                                                                                                                                                                                                                                                                                                           CATGACCACGCCCACGGCTCCCTCGGCGCCCACGAGCATGGCGTAGCCAAGCTCAACGCAGTACTCGATGGCAATACCCTGGAACTGGAGCTGGACAGCCCGGCAATGAACCTGGTCGGCTTCGAGCATGCCGCCAGCAGCGATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/597370‑597221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacCAGGTTCATTGCCGGGCTGTCCAGCTCCAGTTCCAGGGTATTGCCATCGAGTACTGCGTTGAGCTTGGCTACGCCATGCTCGTGGGCGCCGAGGGAGCCGTGGGCGTGGTCATGATCATGGTCATCGTGAGCATGGGCCACGGCCAG  >  NC_002947/597257‑597403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.