New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 911199 = | 67 (1.330) | 6 (0.120) | 5/248 | NT | 9.1% | coding (1707/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA |
? | NC_002947 | 911245 = | 55 (1.140) | coding (1753/2853 nt) | fruB | PTS fructose transporter subunit EI/HPr/IIA |
CGATGCACCCGCGCCGACCACTGCTGGTATGCCCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/911280‑911199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGTG > NC_002947/911245‑911386 CGATGCACCCGCGCCGACCACTGCTGGTATGCCCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGC < 8:226020/81‑1 CCCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGGTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTG < 7:288876/136‑1 CCCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGGTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTG > 8:288876/1‑136 CCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTC > 3:50529/1‑149 GCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACC > 3:175239/1‑149 GCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACC > 3:179340/1‑149 GCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACC < 4:50529/149‑1 CTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGTG < 4:175239/149‑1 CTGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGTG < 4:179340/149‑1 CGATGCACCCGCGCCGACCACTGCTGGTATGCCCAACGCCCGGGCGACGATGGCACTGTGGGCCGTGGCGCCGCCCTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/911280‑911199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGTG > NC_002947/911245‑911386 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |