| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 942243 | 49 (0.970) | 3 (0.060) | 3/244 | NT | 5.8% | coding (3379/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | = 942267 | 52 (1.090) | coding (3355/18933 nt) | PP_0806 | surface adhesion protein | |||||
GATACGTTGCCGGCGGCATCGGTGAGGGTGACTTGCAAGGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/942089‑942243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGCAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTGCAA < NC_002947/942267‑942121 GATACGTTGCCGGCGGCATCGGTGAGGGTGACTTGCAAGGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGT < 5:139779/149‑1GATACGTTGCCGGCGGCATCGGTGAGGGTGACTTGCAAGGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGT > 5:142070/1‑149GATACGTTGCCGGCGGCATCGGTGAGGGTGACTTGCAAGGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGT < 7:289985/149‑1 GGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGTGCCGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCAC < 6:142070/149‑1 ACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGTGCCGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACT > 3:115595/1‑134 ACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGTGCCGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACT < 4:115595/134‑1 CCGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGGAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTG < 8:32268/149‑1 CGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGCAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTG > 3:81155/1‑148 CGGCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGCAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTG > 5:20461/1‑148 tCAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGCAGGTTCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTGCAA < 8:285217/148‑1 GCAGCCATCTCAGTGGGAGAGGCGAAGCCTGCAATACCTTGCAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTGCAA < 8:289476/149‑1 GATACGTTGCCGGCGGCATCGGTGAGGGTGACTTGCAAGGTGCTGCCGTCGTTCACGGCAGGATTCAGGGTGACGGTGAAGGTGCCATCCGCGGCGACGGTACCGGTCGCGAGGATGTTGCCGGCCGCGTCACGCACCTGCACGGTAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/942089‑942243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcAGCCAGCTCAGTGGTCGAGGCGAAGCCGGCACTACCGTGCAGGTGCGTGACGCGGCCGGCAACATCCTCGCGACCGGTACCGTCGCCGCGGATGGCACCTTCACCGTCACCCTGAATCCTGCCGTGAACGACGGCAGCACCTTGCAA < NC_002947/942267‑942121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |