| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1215888 = | 58 (1.150) | 4 (0.080) | 4/246 | NT | 7.0% | coding (1071/4305 nt) | PP_1061 | ATP‑dependent DNA helicase |
| ? | NC_002947 | 1215925 = | 51 (1.060) | coding (1034/4305 nt) | PP_1061 | ATP‑dependent DNA helicase | |||||
GCCGCACACCATGGCAGCCTGTCCAAAGCGCTGCGCCTGGATGCGGAGCAGCGGCTCAAGAGCGGCCAGCTCCAGGTGCTGGTAGCGACCGCATCGCTGGAGCTTGGCATTGATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1216040‑1215888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCT > NC_002947/1215925‑1216067 GCCGCACACCATGGCAGCCTGTCCAAAGCGCTGCGCCTGGATGCGGAGCAGCGGCTCAAGAGCGGCCAGCTCCAGGTGCTGGTAGCGACCGCATCGCTGGAGCTTGGCATTGTTATCGGCGATATCGACCTGGTCTGCCAGGTCGCCT < 1:211458/148‑1 GCACACCATGGCAGCCTGTCCAAAGCGCTGCGCCTGGATGCGGAGCAGCGGCTCAAGAGCGGCCAGCTCCAGGTGCTGGTAGCGACCGCATCGCTGGAGCTTGGCATTGATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCC > 3:112303/1‑149 GCACACCATGGCAGCCTGTCCAAAGCGCTGCGCCTGGATGCGGAGCAGCGGCTCAAGAGCGGCCAGCTCCAGGTGCTGGTAGCGACCGCATCGCTGGAGCTTGGCATTGATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCC > 3:17530/1‑149 CATTGATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGC > 4:246271/1‑149 ATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACA > 7:160587/1‑138 ATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACA < 8:160587/138‑1 GCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCG < 3:246271/149‑1 TCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCT < 7:256686/149‑1 GCCGCACACCATGGCAGCCTGTCCAAAGCGCTGCGCCTGGATGCGGAGCAGCGGCTCAAGAGCGGCCAGCTCCAGGTGCTGGTAGCGACCGCATCGCTGGAGCTTGGCATTGATATCGGCGATATCGACCTGGTCTGCCAGGTCGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1216040‑1215888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCT > NC_002947/1215925‑1216067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |