| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1317107 = | 62 (1.230) | 4 (0.080) | 4/248 | NT | 6.3% | coding (525/1989 nt) | PP_1150 | membrane protein |
| ? | NC_002947 | 1317150 = | 59 (1.220) | coding (568/1989 nt) | PP_1150 | membrane protein | |||||
CCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317256‑1317107‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGCCTTAGCCAGAAA > NC_002947/1317150‑1317296 CCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGC > 5:308475/1‑149CCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGC > 8:162249/1‑149 ACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGC < 3:108673/120‑1 ACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGC > 4:108673/1‑120 TCCTCTCCGCCCCGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTT < 4:309148/120‑1 TCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTT > 3:309148/1‑120 CTCCGCCCAGCATGGAGCTGGCGGCCTGCAGGCCCTTCTGCCAGGCCTGCCGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAGGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTC > 8:160553/1‑149 CGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGCCATGCTGGGCGGAGAGGACGAGGCGCGCAAGGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAG < 7:160553/149‑1 CCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGCCTTAGCCAGAAA < 4:187742/149‑1 CCATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGACAACGTGCCCGTGCCATTCGTGGCCTTAGCCAGAAA > 4:285524/1‑149 CCGCGATTGCCCTCGAACCAGGCATGTTCACGTTGGCTGTCGATGGCAACGATGCGCCCCAGGCTTTCCAGCAGGCCTTTGCGCGCCTCGTCCTCTCCGCCCAGCATGGCGCTGGCGGCCTGCAGGCCGTTCTGCCAGGCCTGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1317256‑1317107‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccATGCTGGGCGGAGAGGACGAGGCGCGCAAAGGCCTGCTGGAAAGCCTGGGGCGCATCGTTGCCATCGACAGCCAACGTGAACATGCCTGGTTCGAGGGCAATCGCGGGCGCCAACGTGCCCGTGCCATTCGTGGCCTTAGCCAGAAA > NC_002947/1317150‑1317296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |