New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1636413	49 (0.970)	4 (0.080)	4/242	NT	7.7%	coding (590/684 nt)	recO	DNA repair protein RecO
	?	NC_002947	= 1636437	50 (1.060)					coding (614/684 nt)	recO	DNA repair protein RecO

AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1636259‑1636413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGTGCGTCCCAGTCGGCTTCAGCCAGGGCCAGCAACTCGATCCCACGAAACAGGCCGGGCTGCAACAGCTCGACCCGCTCCAGGCCGGCATCCACGCGCAGGCGATACAGGC  <  NC_002947/1636437‑1636296                                                                                                                                                                                                                                                                                                           AACCAAGACGTCAACGCCCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCAC                                                                                                                                                       >  2:276266/1‑148  ACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCT                                                                                                                                                     <  4:200941/149‑1  ACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGAGTGGATGCCGGCCTGGAGCGGGTCGAGCTGATGAAGCCCGGCCTGTTTCGTGGGATCGAGTTGCAGCCCCTGGCTGAAGCAGACTGGGACGCACCT                                                                                                                                                     >  2:116290/1‑149   CCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTG                                                                                                                                                    >  8:29707/1‑149                  CCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTATCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGG                                                                                                                                                   >  2:111477/1‑135                      CCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCATCAGCCGCTTTG                                                                                                                                   >  3:195296/1‑147                                       CCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG                                                                                                                <  4:195296/149‑1                                              CGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGT                                                                                                               >  5:18130/1‑143                                              CGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGT                                                                                                               <  6:18130/143‑1                                                                                                                                                    CCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGTGCGTCCCAGTCGGCTTCAGCCAGGGCCAGCAACTCGATCCCACGAAACAGG‑‑TGGCTGCAACAGCTCGACCCGCTCCAGGCCGGCATCCACGCGCAGGCGATACAGGC  <  7:8449/148‑1                                                                                                                                                     CTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGTGCGTCCCAGTCGGCTTCAGCCAGGGCCAGCAACTCGATCCCACGAAACAGGCCGGGCTGCAACAGCTCGACCCGCTCCAGGCCGGCATCCACGCGCAGGCGATACAGGC  <  4:77278/149‑1                                                                                                                                                     CTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGTGCGTCCCAGTCGGCTTCAGCCAGGGCCAGCAACTCGATCCCACGAAACAGGCCGGGCTGCAACAGCTCGACCCGCTCCAGGCCGGCATCCACGCGCAGGCGATACAGGC  >  8:9616/1‑149                                                                                                                                                                                                                                                                                                           AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1636259‑1636413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGTGCGTCCCAGTCGGCTTCAGCCAGGGCCAGCAACTCGATCCCACGAAACAGGCCGGGCTGCAACAGCTCGACCCGCTCCAGGCCGGCATCCACGCGCAGGCGATACAGGC  <  NC_002947/1636437‑1636296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.