New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1675114 =59 (1.170)3 (0.060) 3/244 NT 5.2% coding (281/1305 nt) hom homoserine dehydrogenase
?NC_002947 1675157 = 54 (1.130)coding (324/1305 nt) hom homoserine dehydrogenase

CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1675162‑1675114
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA  >  NC_002947/1675157‑1675303
                                                                                                                                                                                                    
CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGC                                                 >  7:276033/1‑149
 CATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGC                                                 >  2:193821/1‑148
      ACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAGGGC                                           <  8:276033/149‑1
                                          TTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCAT        >  3:72816/1‑148
                                            GCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCAT     >  6:287378/1‑149
                                             CCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCAT     <  6:42235/148‑1
                                              CGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCA   <  6:15627/149‑1
                                               GTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA  <  8:189530/149‑1
                                                                                                                                                                                                    
CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1675162‑1675114
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA  >  NC_002947/1675157‑1675303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.