New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1675114 = | 59 (1.170) | 3 (0.060) | 3/244 | NT | 5.2% | coding (281/1305 nt) | hom | homoserine dehydrogenase |
? | NC_002947 | 1675157 = | 54 (1.130) | coding (324/1305 nt) | hom | homoserine dehydrogenase |
CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1675162‑1675114 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA > NC_002947/1675157‑1675303 CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGC > 7:276033/1‑149 CATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGC > 2:193821/1‑148 ACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAGGGC < 8:276033/149‑1 TTGCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCAT > 3:72816/1‑148 GCCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCAT > 6:287378/1‑149 CCGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCAT < 6:42235/148‑1 CGTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCA < 6:15627/149‑1 GTGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA < 8:189530/149‑1 CCATGCACGGCAATCAGCGCCTTGTTGGCGGTGACCACGTGCTTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1675162‑1675114 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgtGCATGGCAACGAAATCTTCGCCAAAGCCCGCGAGAAAGGCGTGATTGTTGCGTTCGAGGCGGCCGTAGCCGGTGGCATCCCGGTGATCAAGGCCATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGCTGGCCGGCATCATCAA > NC_002947/1675157‑1675303 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |