| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1791570 | 59 (1.170) | 3 (0.060) | 3/252 | NT | 5.2% | coding (220/1359 nt) | rseP | regulatory intramembrane protein RIP |
| ? | NC_002947 | = 1791610 | 51 (1.040) | coding (260/1359 nt) | rseP | regulatory intramembrane protein RIP | |||||
GAATTCGGTCACTTCTGGGTGGCGCGCCGCTGCGGCGTCAAGGTGCTGCGTTTCTCGGTGGGTTTCGGCACGCCGCTGCTGCGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1791420‑1791570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAGCA < NC_002947/1791610‑1791463 GAATTCGGTCACTTCTGGGTGGCGCGCCGCTGCGGCGTCAAGGTGCTGCGTTTCTCGGTGGGTTTCGGCACGCCGCTGCTGCGGTGGCGTGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGAT > 6:51820/1‑149 AATTCGGTCACTTCTGGGTGGCGCGCCGCTGCGGCGTCAAGGTGCTGCGTTTCTCGGTGGGTTTCGGCACGCCGCTGCTGCGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATG < 1:180338/149‑1 CGTTTCTCGGTGGGTTTCGGCACGCCGCTGCTGCGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATGCCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATC < 3:245699/148‑1 CGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATGCCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGAC < 5:66112/120‑1 CGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATGCCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGAC > 6:66112/1‑120 TGCCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAG > 4:10357/1‑149 TGCCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAG > 6:121569/1‑149 CCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGCACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAGCA > 3:48942/1‑149 CCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAGC < 5:121569/148‑1 CCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGG < 5:86213/89‑1 CCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGG > 6:86213/1‑89 GAATTCGGTCACTTCTGGGTGGCGCGCCGCTGCGGCGTCAAGGTGCTGCGTTTCTCGGTGGGTTTCGGCACGCCGCTGCTGCGGTGGCATGACCGCCACGGCACCGAGTTCGTTGTTGCGGCCATTCCTCTGGGTGGCTACGTCAAGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1791420‑1791570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCCAGCGCTGGCGGCACATCGCCTTCGCGCTCGTCGAGCATCTTGACGTAGCCACCCAGAGGAATGGCCGCAACAACGAACTCGGTGCCGTGGCGGTCATGCCACCGCAGCAGCGGCGTGCCGAAACCCACCGAGAAACGCAGCA < NC_002947/1791610‑1791463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |