New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1804378 | 52 (1.030) | 3 (0.060) | 3/244 | NT | 5.4% | coding (731/948 nt) | accA | acetyl‑CoA carboxylase carboxyltransferase subunit alpha |
? | NC_002947 | = 1804405 | 55 (1.150) | coding (758/948 nt) | accA | acetyl‑CoA carboxylase carboxyltransferase subunit alpha |
ATCGCTACCGTGATCGGTGAGGGTGGTTCCGGTGGGGCACTGGCCATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1804224‑1804378 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagacgcTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGCCAGTGCCC < NC_002947/1804405‑1804258 ATCGCTACCGTGATCGGTGAGGGTGGTTCCGGTGGGGCACTGGCCATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGC < 4:217472/149‑1 CATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGC < 5:225299/149‑1 CATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTC > 5:122654/1‑141 CATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTC < 6:122654/141‑1 CAGACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGC > 3:58135/1‑147 CAGACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGC < 4:58135/147‑1 GACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGCCAGT > 2:4666/1‑149 GACGCTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGCCAGT > 5:86234/1‑149 CTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGCCAGTGCCC < 2:81916/149‑1 ATCGCTACCGTGATCGGTGAGGGTGGTTCCGGTGGGGCACTGGCCATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1804224‑1804378 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagacgcTCGGCGGTGATGCCCATGGCCTCGGCCGCGTCTGCTGCTTTATCGGCAGTTTTCCACAGAATCGAAGCACAGCCTTCCGGCGAGATCACCGAGTAGGTGGAGTACTGCAGCATGTTCAGTTGGTCGCACACGCCAATGGCCAGTGCCC < NC_002947/1804405‑1804258 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |