New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1884706 =	70 (1.390)	4 (0.080)	3/248	NT	5.5%	coding (89/420 nt)	PP_1692	hypothetical protein
	?	NC_002947	1884739 =	70 (1.450)					coding (122/420 nt)	PP_1692	hypothetical protein

GCCGGTCACGGGCGTTGCCACAATCTCGGCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1884858‑1884706 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAGGCCATGAGCTGCTGCGTCAGGC  >  NC_002947/1884739‑1884886                                                                                                                                                                                                                                                                                                               GCCGGTCACGGGCGTTGCCACAATCTCGGCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGC                                                                                                                                                          <  4:299492/149‑1    GGTCACGGGCGTTGCCACAATCTCGGCACACCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCCGGTGCTTGACCTGAGGGTTGTCGCCCATCCTCGTACTTACGAGCAAC                                                                                                                                                       >  4:50915/1‑149     GTCACGGGCGTTGCCACAATCTCGGCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACC                                                                                                                                                      >  5:68214/1‑149                             GCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAAC                                                                                                                                                       <  1:267864/124‑1                             GCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAAC                                                                                                                                                       >  2:267864/1‑124                                                                                                                   CCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACCCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGGGTGGTTGTGGCGCAGCGCCGCCTGGGGC                                                                     >  8:62797/1‑120                                                                                                                    CTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACCCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCC                                       >  5:20363/1‑149                                                                                                                    CTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACCCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTG                                                                                        >  1:238942/1‑100                                                                                                                    CTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACCCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTG                                                                                        <  2:238942/100‑1                                                                                                                                                     CAACCCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAGGCCATGAGCTGCTGCGTC      <  2:300514/149‑1                                                                                                                                                         CCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCCGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAG                        <  1:67030/127‑1                                                                                                                                                         CCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAGGCCATGAGCTGCTGCGTCAGGC  >  1:17181/1‑149                                                                                                                                                         CCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAG                        >  2:67030/1‑127                                                                                                                                                                                                                                                                                                               GCCGGTCACGGGCGTTGCCACAATCTCGGCACAGCATCTGCCCCAGGCGGCTCTGCGCCACAACCACACCTTGGCGCGCCGGCTGCTTCAACAAGCGCCCGGCCAGGTGCTTGACCTGAGGGTTGTCGCCCAGGCGCGGACTGTCGAGCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1884858‑1884706 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccCTCAGGTCAAGCACCTGGCCGGGCGCTTGTTGAAGCAGCCGGCGCGCCAAGGTGTGGTTGTGGCGCAGAGCCGCCTGGGGCAGATGCTGTGCCGAGATTGTGGCAACGCCCGTGACCGGCGTATAGGCCATGAGCTGCTGCGTCAGGC  >  NC_002947/1884739‑1884886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.