| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1942883 = | 62 (1.230) | 4 (0.080) | 4/248 | NT | 6.4% | coding (49/1665 nt) | actP‑I | acetate permease |
| ? | NC_002947 | 1942926 = | 58 (1.200) | coding (92/1665 nt) | actP‑I | acetate permease | |||||
GTAGTCCGATGCCGACTTGTTGCGTTTGGAGGCCCAATAGGTGATGCCGAGGGTGAAGGCGACGAAGGCCACGAACATGGCGATGGCGGAAACGTTCAGCGGTTGTTTCTGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1943035‑1942883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGACTACTACGCTGCCGGGGGCAAGATCACCGGCTTCCAGAA > NC_002947/1942926‑1943070 GTAGTCCGATGCCGACTTGTTGCGTTTGGAGGCCCAATAGGTGATGCCGAGGGTGAAGGCGACGAAGGCCACGAACATGGCGATGGCGGAAACGTTCAGCGGTTGTTTCTGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGG < 1:128248/149‑1GTAGTCCGATGCCGACTTGTTGCGTTTGGAGGCCCAATAGGTGATGCCGAGGGTGAAGGCGACGAAGGCCACGAACATGGCGATGGCGGAAACGTTCAGCGGTTGTTTCTGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGG < 8:129815/149‑1 TGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTC < 5:175850/106‑1 TGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTC > 6:175850/1‑106 GCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAAAGCAACAAGTCGGCATCGGA > 6:146413/1‑149 CACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGAC < 5:146413/149‑1 TGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGACTACTACGCTGCCGGGGGCAAGATCACCGGCTTCCAGAA < 7:129815/148‑1 GTAGTCCGATGCCGACTTGTTGCGTTTGGAGGCCCAATAGGTGATGCCGAGGGTGAAGGCGACGAAGGCCACGAACATGGCGATGGCGGAAACGTTCAGCGGTTGTTTCTGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1943035‑1942883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGACTACTACGCTGCCGGGGGCAAGATCACCGGCTTCCAGAA > NC_002947/1942926‑1943070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |