| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2071908 = | 51 (1.010) | 4 (0.080) | 4/244 | NT | 7.4% | coding (1500/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor |
| ? | NC_002947 | 2071943 = | 52 (1.090) | coding (1465/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor | |||||
AAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2072057‑2071908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttggCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCAC > NC_002947/2071943‑2072090 AAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTG < 5:111895/149‑1 AGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGCCACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTG < 1:253983/149‑1 AGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGG < 4:180203/149‑1 AACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCC > 1:16645/1‑129 AACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCC < 2:16645/129‑1 GCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTC < 3:77886/146‑1 GCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTC > 4:77886/1‑146 GCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCG > 1:300458/1‑134 GCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCG < 2:300458/134‑1 GCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCAC < 6:111895/149‑1 AAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCG‑AACACCACGGTATACGCCAGCTACGCCAAGGGCCTGTCTGCCGGAGGCACGGCCCCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2072057‑2071908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttggCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCAC > NC_002947/2071943‑2072090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |