| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2090812 = | 60 (1.190) | 6 (0.130) | 5/244 | NT | 10.2% | coding (138/1680 nt) | deaD | ATP‑dependent DEAD‑box RNA helicase DeaD |
| ? | NC_002947 | 2090867 = | 49 (1.030) | coding (193/1680 nt) | deaD | ATP‑dependent DEAD‑box RNA helicase DeaD | |||||
TTTCGAAAGCGGTAGCAACTTGCAGCGCCAACTCACGGGTTGGCGCCAGGATCAGGGCTTGCGGTTCGCGCTTGCTCACATCGATCTTGTTCAGGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2090960‑2090812‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatcCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACCTACGCCAAGCAGATGCCGGGCGTGAACGTTGTCGCCGTCTACGGTGGT > NC_002947/2090867‑2091010 TTTCGAAAGCGGTAGCAACTTGCAGCGCCAACTCACGGGTTGGCGCCAGGATCAGGGCTTGCGGTTCGCGCTTGCTCACATCGATCTTGTTCAGGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGAc > 2:200831/1‑147TTTCGAAAGCGGTAGCAACTTGCAGCGCCAACTCACGGGTTGGCGCCAGGATCAGGGCTTGCGGTTCGCGCTTGCTCACATCGATCTTGTTCAGGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGAT > 3:26188/1‑148 GGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCG < 7:85533/125‑1 GGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCG > 8:85533/1‑125 GATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAA > 1:135351/1‑149 TCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACC > 1:93936/1‑149 TCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACC > 3:272584/1‑149 CGGTGCCAGTCTGCGCCTGGCCGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACCTACGCCAAGCAGATGCCGGGCGTGAAC < 2:93936/149‑1 CGATCCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACCTACGCCAAGCAGATGCCGGGCGTGAACGTTGTCGCCGTCTACGGTGGT < 1:122102/149‑1 TTTCGAAAGCGGTAGCAACTTGCAGCGCCAACTCACGGGTTGGCGCCAGGATCAGGGCTTGCGGTTCGCGCTTGCTCACATCGATCTTGTTCAGGATCGGCAGGGCGAAGGCAGCGGTTTTGCCGGTGCCAGTCTGCGCCTGGCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2090960‑2090812‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatcCTGAACAAGATCGATGTGAGCAAGCGCGAACCGCAAGCCCTGATCCTGGCGCCAACCCGTGAGTTGGCGCTGCAAGTTGCTACCGCTTTCGAAACCTACGCCAAGCAGATGCCGGGCGTGAACGTTGTCGCCGTCTACGGTGGT > NC_002947/2090867‑2091010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |