New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2281454 = | 54 (1.070) | 3 (0.060) | 3/238 | NT | 6.6% | coding (276/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
? | NC_002947 | 2281504 = | 35 (0.750) | coding (326/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
CGCCCCCTTCGGGGATGCAGTGCCAGCCTGGATAGCGCGCTTGCCAAGGTTCCCAGAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281611‑2281454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGC > NC_002947/2281504‑2281650 CGCCCCCTTCGGGGATGCAGTGCCAGCCTGGATAGCGCGCTTGCCAAGGTTCCCAGAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCC < 2:197360/149‑1 CCCCCTTCGGGGATGCAGTGCCAGCCTGGATAGCGCGCTTGCCAAGGTTCCCAGAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTG > 3:38212/1‑149 CATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCG > 7:17853/1‑148 ATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCG > 6:70820/1‑147 CCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGG < 5:70820/149‑1 CTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACT > 7:82407/1‑149 GGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGAT < 3:132384/149‑1 GGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGA < 7:289890/148‑1 GGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTG < 2:241575/147‑1 GCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATC < 1:213400/149‑1 GGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATG > 2:320829/1‑148 GGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGAGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATG > 4:238480/1‑148 GAACTGCATTGGCTAGGCTACGGCGGCTACCGTGGACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGC < 4:173520/148‑1 CGCCCCCTTCGGGGATGCAGTGCCAGCCTGGATAGCGCGCTTGCCAAGGTTCCCAGAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281611‑2281454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGC > NC_002947/2281504‑2281650 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |